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  Home > Genomes > Hydra vulgaris > gi|449668763|ref|XP_002161897.2|

Domain assignment for gi|449668763|ref|XP_002161897.2| from Hydra vulgaris

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|449668763|ref|XP_002161897.2|
Domain Number 1 Region: 21-160
Classification Level Classification E-value
Superfamily C-type lectin-like 5.77e-33
Family C-type lectin domain 0.00068
Further Details:      
 
Domain Number 2 Region: 197-305
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-30
Family Spermadhesin, CUB domain 0.00084
Further Details:      
 
Domain Number 3 Region: 320-420
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 7.07e-20
Family Spermadhesin, CUB domain 0.003
Further Details:      
 
Domain Number 4 Region: 546-610
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 3.1e-17
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 5 Region: 1692-1823
Classification Level Classification E-value
Superfamily Growth factor receptor domain 1.37e-16
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 6 Region: 890-959
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.36e-16
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 7 Region: 2018-2215
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.38e-16
Family Laminin G-like module 0.034
Further Details:      
 
Domain Number 8 Region: 424-493
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000431
Family Complement control module/SCR domain 0.0025
Further Details:      
 
Domain Number 9 Region: 598-664
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000514
Family Complement control module/SCR domain 0.0018
Further Details:      
 
Domain Number 10 Region: 477-537
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000625
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 11 Region: 766-832
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000153
Family Complement control module/SCR domain 0.0018
Further Details:      
 
Domain Number 12 Region: 823-901
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000695
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 13 Region: 1592-1634
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000219
Family EGF-type module 0.0064
Further Details:      
 
Domain Number 14 Region: 1819-1860
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000401
Family EGF-type module 0.0078
Further Details:      
 
Domain Number 15 Region: 1553-1595
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000566
Family EGF-type module 0.0058
Further Details:      
 
Domain Number 16 Region: 1629-1671
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000067
Family EGF-type module 0.0042
Further Details:      
 
Domain Number 17 Region: 1935-1978
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000921
Family EGF-type module 0.0079
Further Details:      
 
Domain Number 18 Region: 1973-2013
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000219
Family EGF-type module 0.0069
Further Details:      
 
Domain Number 19 Region: 631-740
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000282
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 20 Region: 1515-1558
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000307
Family EGF-type module 0.0076
Further Details:      
 
Domain Number 21 Region: 1478-1519
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000392
Family EGF-type module 0.013
Further Details:      
 
Domain Number 22 Region: 1345-1486
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000785
Family Growth factor receptor domain 0.0098
Further Details:      
 
Domain Number 23 Region: 154-195
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000012
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 24 Region: 1896-1939
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000014
Family EGF-type module 0.022
Further Details:      
 
Domain Number 25 Region: 944-1009
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000153
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 26 Region: 1853-1895
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000726
Family EGF-type module 0.0054
Further Details:      
 
Domain Number 27 Region: 2322-2377
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000106
Family Complement control module/SCR domain 0.0061
Further Details:      
 
Weak hits

Sequence:  gi|449668763|ref|XP_002161897.2|
Domain Number - Region: 1286-1376
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0816
Family Growth factor receptor domain 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|449668763|ref|XP_002161897.2|
Sequence length 2390
Comment PREDICTED: uncharacterized protein LOC100208285, partial [Hydra magnipapillata]
Sequence 
MVACNTNVKGYVDSKQNNEFYAANYKCPNGWQQRCEKCYLYVNESKQWTDAQYYCKQNGG
NLVTIKEDAVNLFLARYVQYSSRLAITIWTGLHARKVHKEFQWVDNSESVHYEFRWLPGQ
PNMVTLDEGCVEMYTKSRQYLWDDVSCSKESPFVCQTDGCIIGTQRCDNGKCVSKHLFCD
SKNDCGDFSDEKNCTKCNEHYTAQEGSISSPNFPQHYGNNRDCTWLIEVESSYIIEIKFL
EFFIENSFDWVEVFDGPTLASKSFGKFSGNFKPEVILSSSSKILVHLKSDKSTSDKGFFA
RYKAVKKGCNVDLIINSNKPEYISSPNFPLNYPDNTKCEWTIRNEDPSKILTFQLLELET
EENDFIEVRDGLTEDNALLGKFFGNFSNIQKRHIFTSNFKMHVKFQSNFQLNQKGFRAVI
FSGCPMLPAINGGSFRQDQKFYGASVEYKCDSRFRIKSENGNVRKCMYGGNWSEPAPFCE
EINCGHPGTIENGGFEIYPLNSTFVFMTSVKYSCNVGYILVGEPNRVCQVNSTWSGGVER
KCEVLKCPDPGTPVNGTRSGNEFNVGSSITFSCEKGFRRHGARTITCGITGKWSSETPLC
KVVVCQLPSFSLNTIISSSSIGFNTPYKTVLHISCKKGFELIGSVNITCTESGAWKPDVP
QCIDINECLNNPCRGLGSQCTNLMGSYKCTCKSGFRQIDETTCEDIDECKSSGKTVKCNQ
KCTNIDGGYFCSCEDGYFLYDGDNKTVNRVEAEESFVNHTCLGNPCKLPKIPENGYILNY
GNRYPTEITFQCDKGWIVDGDLSIKCLKNGSWSGSISDCIAARCNPLPDVPNSSSVVDGG
LVKGQYSQGTIYTYTCINGYEIISGNSKRMCSQNATASFWSGSSPVCERVSCGPLENPKN
GHVNITGDKYGDSSKFFCDGGYIITGNDSSTCQANGRWSASSPFCLASPCPDPGIPINGE
IIGLISLDQTITFRCLVNGSILIGDNKRTCIFNKSTGLNQWNGSQPFCKDTSTPTFKFCP
MSTIEFTLPQSEKSMMVNWTLPTLTDNVHNLLNITVSPDYVSPMVMPAGLNIITYTATYK
DGSTAVCEVKINVQDKEIPKIFCPKNIVIKSDLSSKVFWSDGIYTDNVGIKNVIFNPPNG
TILESNKYHKVTMTVEDISGNSDSCVMEIYVEERKPLISCLKGSLSIDFTTTGDNTNEKP
FLDIFTFLNNLKNSTCSFIYQTGNLISNGTSVAGDFKILSHDDGVIPLLNGHLEECKTIL
LKDLDLFKTNLLQLTSSVDIKLLNISSCCPLNKSYCCPTGHLIKTTGLTVKASYCIPCGL
GMYHNSTNNKCLNCPVGFYNDLEFADQCKRCPNETNNLKVQSDSCTKMCAAGSYSSTGLE
PTCRKCDYGEYQSQVGAYNCIKCPYNLTTSRSGSENISECKAQCSPGTYSSTGLEPCTKC
AKGLFQNEIGRSYCKLCPSGGIYLGMEGATSEANCPSKNACDEKPCRNGATCNAGNYSYT
CTCKPGWTGVNCEVDIDECASSPCGRHGTCTNLINDFNCTCIKGIIGKQCETNIDDCKND
TCRNGGICNDLVDDFKCLCAAGFEGKRCEINKNECEPNPCLKNSTCEDLINDFKCNCIPG
YVGKLCDVDIDECAMSPCFNNATCVDKVNAFECKCQPGFNGTLCETDIDECSTQPCANNG
SCIDIVNGFLCKCIDGFRGSNCSINIDECDPSPCLHNSTCVDQINGFQCECSPGYFGLRC
ETEINECESQPCSNNATCVDKINDYQCLCNIGFEGKQCEIDINECQPNPCVNGSCKDLVG
DYLCECQPGFDGRNCSNLIDNCFSLPCKNNGNCTNKVNNYTCTCQAGFSGSDCETNINEC
DPDPCNSNALNCTDLINGYICYCKLGFRGENCSEIIDNCNPQPCRHNSTCTNRFVTNDFH
CNCSLGYEGDRCEIEIDECKALPCKNGGNCTDLPGKYLCTCPPGFTGVDCEINIDDCKNV
SCLNGGKCIDLINSYVCECPVTHKGKHCEKKIPDDVDITFPGGDGSYIKHCVKGNASKEF
SISLWFRFLGRSRGVFLNLGFGCETVRPFLIMSHSSIRFQFRNQFSFVMIDNLKINNEKL
VINNGVWHHIYIALSSVTLNFKVVLDGIIVQEEQKAELSGMTFFNESGTILIGKSLLDGK
LIESGFIGDVSQVALFKRVLDSTEIAGLVRNCSRNISDSIIPWVGLMADAGPNVSLLETW
TCGTNVCPPEFTGKFCQTKIDKIPPTVVFCPSPIKVYTEESSVFVTWKEPQFDDDVAVVE
VIRSHSPNGLFSWGDYVITYIAKDAFENSVSCTFEINVTPFNCSEFQTANNSIHACGTWK
YGRFCDYKCHEKYELAVPKPPFYVCGRPGTWSHGPPTYPENPDLLVSECT
Download sequence
Identical sequences gi|449668763|ref|XP_002161897.2|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.