SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|193652381|ref|XP_001949413.1| from Acyrthosiphon pisum

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|193652381|ref|XP_001949413.1|
Domain Number 1 Region: 972-1021,1064-1071,1241-1340
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000101
Family I set domains 0.026
Further Details:      
 
Domain Number 2 Region: 621-668,713-779
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000416
Family I set domains 0.063
Further Details:      
 
Domain Number 3 Region: 79-181
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000315
Family I set domains 0.069
Further Details:      
 
Domain Number 4 Region: 251-355
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000106
Family C1 set domains (antibody constant domain-like) 0.09
Further Details:      
 
Domain Number 5 Region: 814-869,922-979
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000625
Family I set domains 0.048
Further Details:      
 
Domain Number 6 Region: 400-448,515-554
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000122
Family C1 set domains (antibody constant domain-like) 0.081
Further Details:      
 
Weak hits

Sequence:  gi|193652381|ref|XP_001949413.1|
Domain Number - Region: 1377-1428,1472-1509
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00012
Family C1 set domains (antibody constant domain-like) 0.069
Further Details:      
 
Domain Number - Region: 1067-1137
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00128
Family I set domains 0.071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|193652381|ref|XP_001949413.1|
Sequence length 1646
Comment PREDICTED: similar to neuromusculin [Acyrthosiphon pisum]
Sequence
MIWSMKSSDSGGEGGEEDSGGGGESTKAVKWRRHGRQVSTTSASTTLGCRWMVQTMFVFF
LITGTAAVLSNSTFKGEQQSDINARIGQSAFLPCELEPNNVTTGFEMTTQCGTVHSVKWY
RGASRIFLYSGGPRTTQPHREGYTDRYDRSYWSTEPNSTLGFLVMDNITALDEGVYKCEI
TYTKVHEGCNIVQFINLTTYTDPESISVGTYAEIGDVSAHNYIDPSSDFYDDKNSDPKFG
IMKKLTSGAIVGPVDEGNKIRLVCRAGRARPIPQVTWWQHSRGPIYDTDLVDYQYRKVDS
DMSDDVFSYSGLWVAQSILTVIGKRGANGRYECRVKTATDSSPILTSNVEVTVNVSPYSV
EMSTSSSGAPVTKVSKVDDRYKPQNSEHDRNSGAVVYAETTEGQPLVIRCAARGARPQAN
VTWYYYYKDQENDDDNDYGSGIKNEQNVRAPPVQSSKHGAPVMLGNSQQNGGSTARSPSD
YLISEQRRMEGGAEIIGPVEIAQHTEYQADGTRDTHSQLSMSQLHRQQDGSILRCDAFNN
VGSSPNQPLTVNMTIRVKYIPTAWVVPITDGENSGAIVEDEIKNEIGQQRKGGVDGSNNA
NPIVTDASKDTYDGLHYQSILYTVVVNETKELRLNCAYHANPDKLRTPVKWYRDGIELQL
IDEEEPSSSNHGSSASSYAAVTPATGTGTLSGSSSGANTRFNTNTNPMGNSAKYARVKGL
ANGNGGIHGDGNGEDATVLVVRRLTRYDSGRYECRVRNSVGAANSTNFANVRVQYTPKVK
LHVILDDSLDENQTSTTASSNINNNMVGSNPVVLESEHRNVTLRCAVQLEQDQQNIEDTN
SDPSLNLTSVHWYWNGVQMQLPNCTRSPDSSDIFVDEDDGDNEFDTENNENENNAMNFNY
DTSEPQREGEYDTYAVDNDTRRRNKKQRKVVCTDRELILVNVTKNIHGNYSCRAKNAAGL
LTPMSDQTPLIVYFAPGPVTLEFSPRRVIKGRNVTLRCNAQFLGRPQHPTRYSWFRDGHP
FYHQNQGLINPNINSGTGINLGTNGNTGGGNFNPDWFVDHVSLETRANFTCSAYNEGGVT
YSEPVYIEVFAPPNYITGPPQYLGVAYNATHVNASCTVECYPHCSVNWLRRGVLIDPMNN
PNDKERYSILTEYLPAERLKNDFEAVRSTLIWRMDNWPGGRGLDPITDSTEYSCRSSGNE
VGPPVSESIMNFSVEYPPGNMTVSKTVVHVSEGNIPEKVFCHAEGRPQPTFEWRYIASTN
NWNVPGNSSQSTQLSSQQRLLSIANAGNSGVGGGSGSGGSQINNQQLVLNSAVGRQQAGY
YACVARNTHGNGTAYTYLDVMYKPSCQLRMITVDQFKQESSASLTDQSSELEEFLSSSSG
EKRILVCTATANPGQVQYTWTIRNSGRQNDTTTSLTSDSPATERIITVSIGSSGNSGSNE
VDNIGSYNRSILILQDRLEVTNNEDDEGRGSDNIPNNGASEGVRTYVCTVYNTVGSDQCS
IQVQGDAPWWKQLLATIGLGGLPVMVVLVALVVILLLIVIIVIVILLLFVCKNRYIKPGN
GVSGGRQKYSRGGAGQQQDNESNLGATGDSKAAFYENLPFHGMRPPPNQPYKPPAASGYA
EGGDMEYADVDYRNMYYGPINYKQSS
Download sequence
Identical sequences gi|193652381|ref|XP_001949413.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]