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  Home > Genomes > Brugia malayi WS250 > Bm3309

Domain assignment for Bm3309 from Brugia malayi WS250

Domain architecture

Domain assignment details

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Strong hits

Sequence:  Bm3309
Domain Number 1 Region: 725-751,788-935
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.01e-24
Family Laminin G-like module 0.01
Further Details:      
 
Domain Number 2 Region: 546-723
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.44e-18
Family Laminin G-like module 0.043
Further Details:      
 
Domain Number 3 Region: 983-1166
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.0000000000000493
Family Laminin G-like module 0.017
Further Details:      
 
Domain Number 4 Region: 189-227
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000255
Family EGF-type module 0.0049
Further Details:      
 
Domain Number 5 Region: 1496-1622
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000235
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 6 Region: 1360-1395
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000474
Family EGF-type module 0.0076
Further Details:      
 
Domain Number 7 Region: 50-88
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000105
Family EGF-type module 0.006
Further Details:      
 
Domain Number 8 Region: 1281-1318
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000429
Family EGF-type module 0.014
Further Details:      
 
Domain Number 9 Region: 153-196
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000122
Family EGF-type module 0.018
Further Details:      
 
Domain Number 10 Region: 1322-1359
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000122
Family EGF-type module 0.012
Further Details:      
 
Domain Number 11 Region: 1433-1470
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000219
Family EGF-type module 0.0066
Further Details:      
 
Domain Number 12 Region: 1203-1319
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000345
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 13 Region: 420-456
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000453
Family EGF-type module 0.019
Further Details:      
 
Domain Number 14 Region: 229-270
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000219
Family EGF-type module 0.012
Further Details:      
 
Domain Number 15 Region: 1398-1439
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000123
Family EGF-type module 0.012
Further Details:      
 
Domain Number 16 Region: 377-413
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000762
Family EGF-type module 0.039
Further Details:      
 
Domain Number 17 Region: 303-337
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000865
Family EGF-type module 0.014
Further Details:      
 
Weak hits

Sequence:  Bm3309
Domain Number - Region: 343-372
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000141
Family EGF-type module 0.021
Further Details:      
 
Domain Number - Region: 1472-1507
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000659
Family EGF-type module 0.018
Further Details:      
 
Domain Number - Region: 963-1016
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000876
Family EGF-type module 0.015
Further Details:      
 
Domain Number - Region: 92-125
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00492
Family EGF-type module 0.022
Further Details:      
 
Domain Number - Region: 487-518
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0195
Family EGF-type module 0.057
Further Details:      
 
Domain Number - Region: 1637-1676
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0247
Family EGF-type module 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Bm3309
Sequence length 1748
Comment pep supercontig:B_malayi-3.1:Bmal_v3_scaffold24:145052:157609:1 gene:WBGene00223570 transcript:Bm3309 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Bma-crb-1
Sequence 
MKVYIGTKLSDSDTKEKVMIGLARQSLLSQLCRTGIVKVLLERLNGFLTLRHCESNVCLN
GGTCKVNDQDRTFRCLCPVGFEGLLCESEKVCSLKCHNNEVCIFTDVGKPKCNCSEEFSG
ELCEVGSIDCQVQGCSIGERCVLVEGGKWHCVHDACIPNPCQHNASCTLVKDRFECACTG
GFEGSLCENDIDECITTPCKNDAICVNSLGSFICLCKDGFRGTVCEESTLCDPNPCFNNG
ICSIVDGLYHCNCQPGFTSDRCQEQIEEECNCKSDKQICISGICRCPDGFMGKDCDQPLS
WSCIRNESCENGGTCLEATGGCLCPPAFTGIRCEHTLECIVDSNPCIHGNCIWSANGATC
NCENGFEGKYCERNSPEFDPCLRRDCNSGQCVVKGGSAVCICPEENSGEFCENTDICETM
PCLNGGKCFTNFTNMSGFKCICDERFSGTRCEMRVQEMECVPECVEGESCEQRNGTFVCI
KTEISCDDCVHSFRCIENGKYAVCVCDTSWTGPKCDQQIKECQNLFCTQYQICRNEPTTA
GTITSCGCAPGLTGTNCTINTAVTFHNTSFFLYQSPNSVVGLQKSDYTLKVTFRTTVDDT
HILSTEDILSQMQFALNVQRGYLYGNFTGFVYRKLLPFAVNDDHWYTVLFSNINKTVSLE
IREGDFVLSRLKMKERRNMGIYWTRIGKGRANGFRGCVRDLFINGEFTNMLKSASVFGVI
EGCQHSKLCSPNPCQNGGTCIDQWDEFRCACKKPFLPPYCIQQTDEVTFGHHNLKSRLEL
DIEQNLENIKLDTDIDFLMRTNKPNGTLLYLGEKSNEDIGTFIALQILNGSLNIRTRLGG
KKVFSRNISDKIDDNKVHLISLVRDRNNFTITIDDGVASTKFDIENRFDHPLLADTLILG
SSEDLPTDAFSNNDYFKGTLQDLRINNRVVPLTTLPTDIEVQQFGIEIEKDNIQQGTVSD
DICTLLKPCVNGECSNTFNDFECICENSWIGKRCNRRDHCALSSCGTNMTCTNYDGGYVC
SSPATFISTSFAKFKLENGGVAMDISKSLQISFMLRTRSLSGQIIYLKTPTSFLSVSLED
GLLVYEALINDNMKKQRTNLVVNDGVVRSVDINQNGLHIDGKLNANNLSLPLLVNTFGIN
DNLTLIIGQRSDQLPSFDGCLENIHIGITPPISFFVDGRAGNLLENTMHFKLMKRRNIID
NFCYADDLCGLVNPCKNDAVCRDLWNKRVCECQPGFTGTFCETRINRCENHICKFGACIS
GIDEYSCVCLPGYDGQFCDEEMNLCKLSPCLNGGNCTTAKGKYNCDCPPHFVGSRCQVLK
SSKCLPSPCENGANCTVVKDTFKCDCPPGFDGILCDIQKDICQSNPCKNGATCLPKDGDF
KCICTNGYEGRICEEMKDYCSTSPCVHGECITVTDNFLCNCESGWNGEHCDIDINECIRF
PCEHDGNCTNTPGSYHCSCDSYHLGDHCEVVGSCVERPCGDNGDCIQQTSTTHSCVCRRG
YTGDTCDMLIDYCSPNPCENGATCQKFIGGFSCSCLAGFAGETCSLDIDDCINEVCRNGG
HCMDRINGYECDCEGTGYRGTHCTEDIDECELGVCVYGRCTNLIGSYNCICDIGYMGKRC
TVEDPCTLDSLNRTRHDCVHGACVHPTVSMKNDMEVANYECECEFGYGGEYCIHLVEKSR
SVSLGYIVGPMLALIIALLIIGFVLLAVVMIHGRRATQGAYSPSHHESSISRMPMNSMLK
SPPEERLI
Download sequence
Identical sequences A0A1P6BXB7
Bm3309 Bm1_34120 XP_001898272.1.25112

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.