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  Home > Genomes > Brugia malayi WS250 > Bm3148b

Domain assignment for Bm3148b from Brugia malayi WS250

Domain architecture

Domain assignment details

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Strong hits

Sequence:  Bm3148b
Domain Number 1 Region: 1199-1438
Classification Level Classification E-value
Superfamily Ankyrin repeat 6.02e-56
Family Ankyrin repeat 0.0000115
Further Details:      
 
Domain Number 2 Region: 517-560
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000067
Family EGF-type module 0.0081
Further Details:      
 
Domain Number 3 Region: 672-714
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000276
Family EGF-type module 0.004
Further Details:      
 
Domain Number 4 Region: 261-396
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000612
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 5 Region: 749-790
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000129
Family EGF-type module 0.0034
Further Details:      
 
Domain Number 6 Region: 633-671
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000927
Family EGF-type module 0.0046
Further Details:      
 
Domain Number 7 Region: 710-752
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000102
Family EGF-type module 0.0045
Further Details:      
 
Domain Number 8 Region: 196-239
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000117
Family EGF-type module 0.01
Further Details:      
 
Domain Number 9 Region: 391-428
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000192
Family EGF-type module 0.0061
Further Details:      
 
Domain Number 10 Region: 80-122
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000586
Family EGF-type module 0.0095
Further Details:      
 
Domain Number 11 Region: 116-154
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000682
Family EGF-type module 0.0047
Further Details:      
 
Domain Number 12 Region: 555-597
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000837
Family EGF-type module 0.0086
Further Details:      
 
Domain Number 13 Region: 157-200
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000105
Family EGF-type module 0.011
Further Details:      
 
Domain Number 14 Region: 592-637
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000309
Family EGF-type module 0.012
Further Details:      
 
Domain Number 15 Region: 43-79
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000962
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 16 Region: 844-874
Classification Level Classification E-value
Superfamily Notch domain 0.0000017
Family Notch domain 0.0059
Further Details:      
 
Domain Number 17 Region: 881-912
Classification Level Classification E-value
Superfamily Notch domain 0.00000575
Family Notch domain 0.0029
Further Details:      
 
Domain Number 18 Region: 444-486
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000109
Family EGF-type module 0.036
Further Details:      
 
Domain Number 19 Region: 477-521
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000112
Family EGF-type module 0.029
Further Details:      
 
Domain Number 20 Region: 802-834
Classification Level Classification E-value
Superfamily Notch domain 0.0000127
Family Notch domain 0.0016
Further Details:      
 
Domain Number 21 Region: 9-40
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000676
Family EGF-type module 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Bm3148b
Sequence length 1635
Comment pep supercontig:B_malayi-3.1:Bmal_v3_scaffold7:107980:130022:-1 gene:WBGene00223409 transcript:Bm3148b gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Bm3148
Sequence 
MGDRCEERCDCLNGGECLRRGSLSICVCPIGFNGTLCEYRQPSRCDEAPCVHGRCILSKS
LDTFRCECQIGFTGERCDRRNYCEGNPCRNGGSCISTTGGYRCGCPEGFHGNKCELDINE
CHLNPCVRGKCINEFGSYRCDCPHDFTGRNCETLLFNIDPCSTSPCHNNAKCYTYRDKYY
SCECRPGFTGRHCEVNIDDCSENACMNGGTCIDREQGYECKCPPFYTGRFCEEDIDECEL
GLHECKNGATCFNKKEGYQCVCVNGWEGIHCEINKDDCKDALCEAGSTCVDHLAKYTCEC
PPGRIGLLCHMEDPCLSNPCQVGSVCEPDTSSGKYTCECPKGYTGEDCSNDINECNQDHA
VCYNGGTCVNTPGSFHCECPPGYTDWHCQTHVNQCSTNPCLNSGTCLDYGTRFKCVCMSG
FHGKRCELHCPSGYEGENCERRQYIECSITDCLNGGVCSKGSCRCPPGFTGDRCEKKLDP
CKYHNCPQNAICIPINNSVTYKCECKLGFYGHDCKLEMNECASNPCQHGGVCTDHLNGYV
CSCSAGYTGEQCQTNIDDCIHHPCLHGGTCIDGINSYSCHCALPYDGDRCQYELDPCRTN
RCENGAICKPTPTYRNYTCSCTNGFYGYYCDTDIDECAVNNPCLNGGTCANKFGSYHCRC
SDGYTGRNCESDRDDCLPNPCLNGGHCMDELNGYHCECLAGFTGRQCATNINECESSPCE
NGASCIDHINGFECVCRRGFSGTFCQTNDDDCQPGLCLNGGTCVDGVNSYRCRCQRGFTG
KNCQHQIDLEQFNVTDLLEHELCAKHDCITKAGNKVCDQVCNYYACHYDSGDCSAGTKPF
EKCESPSYCAHVFRDGKCDPICNNQECLFDGFDCDSIPEQCSKNDYCTTHYADGQCDREC
NVIGCGWDGGDCDSFDVETPLEGNIIVILLISPDEFLHNAQTFLFTLSQKLRGAVHIRTI
NGKPMIYSWSSEGGIGQLYDVAPEKRYLLVPNLQRVKRQTDQLRGTMVMLTVDVSYCRKI
DREECFSDLFSIVDYLGAANAKQELQELGMPVHSARVELDNAKQAKGISWQTLLICLLIF
VTTVLIAYSMVQQGRKRKTLHARIWHPPPSESCKSSTGNLDTYSIHSGYLFSNYGTAKRS
RADNIPVGIAHPNLYIGEDTQSFLKPKTLSTDERQWTHLHEAADSTIPISLPIEPLLVNV
RGKHGRTPMMQTASNQAKNEEASCEDIRNLLEAGAEIDAQDDSEDTALMLAVKSGRTTVV
DCLLKNGADPTIVDEKDRTPLHHAVAVNIPNIVQLLLDTRQVNVDALDEDNRTPLIICSK
FDIRMGTEIAEMLLKAKADVACAGDKSLTKYDGRTALHFASQHANLDIIRLLIHNGANKD
AQDSLDQTPLFLAASEGHLDAVECLISLGASKEITDQKERSPRDIAAEKEFRDIVHYLDT
VPTPRILPSNMAATLALSTHQRFKKSFKKTTRPVIKKNPSPTYPSAVTALTAQPATSVNP
LTPPNSDGSNYSTTPSPHDTTAVVHGGTAATRGTTVAQATAGHPENAVLQSSSVMLSPYS
DHHNGTGCSPPQMMTAMQAGWLFPANQSSHQQYEEGLFYGTGMLPFVYDQRTLRPSYSQS
HMPHVQQPSTAYYNV
Download sequence
Identical sequences A0A0K0J909
Bm3148b

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.