SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ERN13278 from Amborella trichopoda 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ERN13278
Domain Number 1 Region: 604-795
Classification Level Classification E-value
Superfamily Sec7 domain 1.57e-78
Family Sec7 domain 0.0000014
Further Details:      
 
Domain Number 2 Region: 389-541,908-972,1122-1290,1325-1389,1418-1488
Classification Level Classification E-value
Superfamily ARM repeat 2.58e-16
Family Armadillo repeat 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ERN13278
Sequence length 1791
Comment pep:novel supercontig:GCA_000471905.1:AmTr_v1.0_scaffold00041:221725:253479:-1 gene:AMTR_s00041p00031550 transcript:ERN13278 description:"hypothetical protein"
Sequence
MASSEADSRLSLVVIPSLEKIIKNASWRKHSKLVHECKAVVEKLGLQDPKQQEQEAEPSP
PGPLQDKTLIFSLADSETILRPLILSCESGFVKIVEPALDCIQKLIVFGHLRGEADTNGG
PEATVLHNLMGSVCKCHDLGDEGIELMVLKTLLSAVTSICLRIHGDCLLQIVRTCYDVYL
GSKNMVNQTTAKASLIQMLVIVFRRMEADSSTVPLQPIVVAELMEPAEKLGADSNMTQFV
QGFITKIMQDIDVVLNPGTPVKSAGGAHDGAFESTAVETTNPADLLESTDKDMLDAKYWE
ISMYKTALEGRKGELAEGEVVGDDDLEVQITNKLRRDAFLVFRALCKLSMKTPPKEATAD
PSLMRGKIVALELLKILLENAGAIFRTSERFLGAIKQYLCLSLLKNSASTLMIVFQLSCS
IFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCVDSQVLVDI
FINYDCDVHSSNIFERMVNGLLKTAQGVPPGVATTLLPPQDTTMKLEAMKCLVAILKSMG
DWMNKQLRIPDPHSLKKSEVEESHTESGNGILLANGNAEESSDGSDTHPESANGVSEAAA
LEQRRAYKLELQEGISLFNRKPRKGIEFLINAKKVGDSPEEIADFLKNASGLNKTLIGDY
LGEREDLSLRVMHAYVDSFDFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKC
NPKAFISADTAYVLAYSVILLNTDAHNPMVKNKMSQEDFIRNNRGIDDGKDLQEEYLRSL
YDRITRNEIKMKDDDLAVQNKQSTNSNKILGLDSILNIVIRKRGEDKPMETSDGLIRHMQ
EQFKEKARKSESAYYAATDVVTLRFMIEVCWAPMLAAFSVPLDQSEDDVVIAQCLEGFRY
AIRVTAVMSMKTHRDAFVTSLAKFTSLHSVADIKQKNIDAIKTLITIADEDGNYLQEAWE
HILTCVSRFEHLHLLGEGAPPDSSFFALPQNDLEKSRQQKSTILPVLKRKGPGKLQYAAA
VARRGSYDSAGVGGVVTTEQMTNLVSNLNMLEQVGSFEMNRIFTRSQRLNSEAIIDFVKA
LCKVSMEELRSTSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSI
AIFAMDSLRQLAMKFLEREELANYNFQNEFMKPFVIVMRKSSAIEIRELIIRCVSQMVLA
RVNNVKSGWKSMFMVFSTAAYDDHKNIVLMAFEIIEKIVRDYFPYITETETTTFTDCVNC
LIAFTNSNLNKDVSLNAIAFLRFCAVKLAEGDIGSTAKNRDKEVSAKSGLTSPQSKKDGK
VESLRFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWER
VFDSVLFPIFDYVRHAIDPSGETLQVHGVDSDGDELDQDAWLYETCTLALQLVVDLFVKF
YDTVNPLLKKVLLLLISFIKRPHQSLAGIGIAAFVRLMSNAGGLFSEEKWLEVVLALNEA
NTGTLPDFKRILYEMNVLSGSTDTGDSSMRSGNEGSSDSATHGDETDGVKARRLYFAITD
AKCRTAVQLLLIQAVMEIYNMYRAQLSAKNTVILFEAIHTVASYAHEINCDSFVRAKLQE
LGPTTQMQDPPLLRLENESYQVCLTLLQNLLLDRDTKDGEVEVETFLELCKEVLQVYLKT
AQSITLPGSTSMEPRAQCEPSTESTSTVSRARWPIPLGSAKRRELAARAPLVVATLQAIC
GLEGSSFESNLSRFFPLLSGLVGCEHGSNEVQLALSDMLRSRVGPILLRSC
Download sequence
Identical sequences W1PYB3
XP_006851811.1.86515 ERN13278

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]