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Domain assignment for jgi|Phyra1_1|79239|fgenesh1_pg.C_scaffold_38000057 from Phytophthora ramorum 1.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Phyra1_1|79239|fgenesh1_pg.C_scaffold_38000057
Domain Number 1 Region: 252-404
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.00000119
Family Galectin (animal S-lectin) 0.091
Further Details:      
 
Weak hits

Sequence:  jgi|Phyra1_1|79239|fgenesh1_pg.C_scaffold_38000057
Domain Number - Region: 127-177
Classification Level Classification E-value
Superfamily F-box domain 0.0048
Family F-box domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Phyra1_1|79239|fgenesh1_pg.C_scaffold_38000057
Sequence length 407
Sequence
MLSTLPSPTVPYSAAWRLPHLNSFVVLTKKPSSRHLARRRSIASSTCSTASNSSDDESDA
SDLESEDCCMAYESYAAVAKRSSQPASLRWSDLQRSQNATDMSELLAALRLKRRHTRDGE
ALELAALELCFEFLTLEELQVATQVCAAFHDVISCSEMLLTGLYSRQWLAQMLPETYLSL
PYSDQLALCAARRPDASYELSTRSAVTRLPDGKYQVVNNSMLRNFDKGAVDSIRGVKPLP
VLSCARALHKCISYYEVSLKGCGSVGLASLSDATTRNAYGFGSGEHVGWKGVSYGYHGND
GDFVLNDGAKPYGGEWAAFGPSWGRATAQSENQEEDAPKFTVGCGLDAFKHQVFFTLNGE
LLGAVPATVLPGDYAAAVSLHAFGDEVVINAGAAPFLFDIEGFCASP
Download sequence
Identical sequences H3GQY0
jgi|Phyra1_1|79239|fgenesh1_pg.C_scaffold_38000057 164328.JGI79239

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