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Domain assignment for ENSRNOP00000001691 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000001691
Domain Number 1 Region: 26-99
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 0.0000629
Family Sm motif of small nuclear ribonucleoproteins, SNRNP 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000001691   Gene: ENSRNOG00000001256   Transcript: ENSRNOT00000001691
Sequence length 1073
Comment pep:known chromosome:Rnor_5.0:12:42137231:42203348:-1 gene:ENSRNOG00000001256 transcript:ENSRNOT00000001691 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RGRNSSKGLPQPTISFDGIYANVRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDL
VLDAAHEKSTESSSGPKREEIMESVLFKCSDFVVVQFKDTDSSYARRDAFTDSALSAKVN
GEHKEKDLEPWDAGELTASEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYT
VPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNCSDREG
HGTNTRENKYIPPGQRNREVISWGSGRQSSPRMGQPGPGSMPSRATSHTSDFNPNAGSDQ
RVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHG
SPAPVSTMPKRMSAEGPPRMSPKAQRHPRNHRVSAGRGSMSSGLEFVSHNPPSEAAAPPV
ARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSAGNSPSGPVLASPQAGITPAEAVSMP
VPAASPTPASPASNRALTPSIEAKDSRLQDQRQNSPAGNKENIKASETSPSFSKAENKGV
SPVISEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLSKNREGEKSRDLMKDKTEASAKDS
FIDSGSSSCTSSSSKTNSPSASPSVLSNAEHKRGPEVTSQGVQTSSPACKQEKDDREERK
DTTEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVYTQPVC
FAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQEQHHQSTMMHPAS
AAGPPIVATPPAAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPP
AHAQPGLVSSSAAQFGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATL
HPHPPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAP
TPPSMTPASNTQSPQSSFPAAPQTVFTIHPSHVQPAYTTPPHMAHVPQAHVQSGMVPSHP
TAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
Download sequence
Identical sequences ENSRNOP00000001691

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