SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > Genomes > Rattus norvegicus 76_5.0 > ENSRNOP00000005668

Domain assignment for ENSRNOP00000005668 from Rattus norvegicus 76_5.0

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:	ENSRNOP00000005668
Domain Number 1	Region: 47-157
Classification Level	Classification	E-value
Superfamily	Spermadhesin, CUB domain	1.3e-31
Family	Spermadhesin, CUB domain	0.00053
Further Details:

Domain Number 2	Region: 259-370
Classification Level	Classification	E-value
Superfamily	Spermadhesin, CUB domain	1.28e-26
Family	Spermadhesin, CUB domain	0.0014
Further Details:

Domain Number 3	Region: 450-488
Classification Level	Classification	E-value
Superfamily	LDL receptor-like module	0.0000000000288
Family	LDL receptor-like module	0.001
Further Details:

Domain Number 4	Region: 164-200
Classification Level	Classification	E-value
Superfamily	LDL receptor-like module	0.00000000131
Family	LDL receptor-like module	0.0011
Further Details:

Domain Number 5	Region: 411-449
Classification Level	Classification	E-value
Superfamily	LDL receptor-like module	0.00000013
Family	LDL receptor-like module	0.0021
Further Details:

Domain Number 6	Region: 211-254
Classification Level	Classification	E-value
Superfamily	LDL receptor-like module	0.000000183
Family	LDL receptor-like module	0.0023
Further Details:

Domain Number 7	Region: 374-411
Classification Level	Classification	E-value
Superfamily	LDL receptor-like module	0.000000759
Family	LDL receptor-like module	0.0025
Further Details:

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Molecular Function
Biological Process
Cellular Component

Molecular Function	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

Protein sequence

External link(s)	Protein: ENSRNOP00000005668 Gene: ENSRNOG00000004152 Transcript: ENSRNOT00000005668
Sequence length	858
Comment	pep:known chromosome:Rnor_5.0:7:78885444:78956523:-1 gene:ENSRNOG00000004152 transcript:ENSRNOT00000005668 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MARRWSTKESPRRGSAWLLLFLAGVYGNGALAELSENVHISGVSTACGETPEQIRGPTGI ITSPGWPSDYPAKINCSWLIRANPGEIITISFQDFDIQGSRRCTLDWLTIETYKNIESYR ACGSTIPPPYISSQDHVWIRFHSDDSVSRKGFRLAYFSGKSEEPHCACDQFRCGNGKCIP EAWKCNSMDECGDSSDEEVCVQDAHPPTTTAFQPCAYNQFQCLSRFTKVYTCLPESLKCD GNIDCLDLGDEIDCDMPTCGQWLKYFYGTFSSPNYPDFYPPGSNCTWLIDTGDHRKVILR FTDFKLDGTGYGDYVKIYDGLEENPRKLLRVLTAFDSHAPLTVVSSSGQIRVHFCADKVN AARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEINCTMCQKEEFPC SRNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGS DEESCPVIVPTRVITAAVIGSLVCGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAEL LRREAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRSQLGFPSIRLPMTGRSR NIWNRIFNFARSRHSGSLALVSGDGDEVVPSQSSSRETERSHPHRSLFSAESDDTDTENE RRDTAGASGGVAAPLPQKVPPTTAVEATVGTGGNSSAQSTRGGHADGREVSSVEAPSVSP ARHQLTSALSRMTQGLRWVRFTLGRSSSTNQNRSPLRQLDTGVSGREDDDDVEMLIPVSD GASDIDANECSRPLLDLASDQVQGFRQPHSSGNPGARTSNRDGPCERCGIVHTAQIPDTC LEAAVKTEACDDEALLLC
Download sequence
Identical sequences	D3ZCF7 ENSRNOP00000005668 ENSRNOP00000005668 NP_001128355.1.100692 NP_001128355.1.4139 10116.ENSRNOP00000005668

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]