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Domain assignment for ENSRNOP00000006780 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000006780
Domain Number 1 Region: 7-98
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.34e-28
Family Canonical RBD 0.0025
Further Details:      
 
Domain Number 2 Region: 95-123
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000119
Family Retrovirus zinc finger-like domains 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000006780   Gene: ENSRNOG00000004996   Transcript: ENSRNOT00000006780
Sequence length 217
Comment pep:known chromosome:Rnor_5.0:7:134255943:134269279:-1 gene:ENSRNOG00000004996 transcript:ENSRNOT00000006780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLD
KDSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC
PKNMLGEREPPKKKEKKKKKKVPEPEEEIEEVEVSEEEGEDPALDSLSQAIAFQQAKIEE
EQNKWRPSTGGPSTSDDSRRPRIKKSAYFSDEEELSD
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Identical sequences Q499V6
10116.ENSRNOP00000006780 ENSRNOP00000006780 ENSRNOP00000006780 NP_001030112.1.100692 NP_001030112.1.4139

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