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Domain assignment for ENSRNOP00000010183 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000010183
Domain Number 1 Region: 295-665
Classification Level Classification E-value
Superfamily Pentein 1.96e-172
Family Peptidylarginine deiminase Pad4, catalytic C-terminal domain 0.000000000345
Further Details:      
 
Domain Number 2 Region: 116-294
Classification Level Classification E-value
Superfamily Peptidylarginine deiminase Pad4, middle domain 3.4e-71
Family Peptidylarginine deiminase Pad4, middle domain 0.0000159
Further Details:      
 
Domain Number 3 Region: 5-115
Classification Level Classification E-value
Superfamily Cupredoxins 5.47e-31
Family Peptidylarginine deiminase Pad4, N-terminal domain 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000010183   Gene: ENSRNOG00000007574   Transcript: ENSRNOT00000010183
Sequence length 665
Comment pep:known chromosome:Rnor_5.0:5:163141202:163182415:1 gene:ENSRNOG00000007574 transcript:ENSRNOT00000010183 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLRERTVRLQYGSRVEAVYVLGTQLWTDVYSAAPAGAKTFSLKHSEGVKVEVVGDGEAEE
VVTNGKQRWALSPSTTLRLSMAQASTEASSDKVTVNYYEEDGSAPIDQAGLFLTAIEISL
DVDADRDGEVEKNNPKKASWTWGPEGQGAILLVNCDRDTPWLPKEDCSDEKVYSKQDLQD
MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRQKLYHVVK
YTGGSAELLFFVEGLRFPDESFSGLVSIHVSLLEYMAEDIPLTPIFTDTVTFRIAPWIMT
PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYMNRGDRWIQDEIEFGYIEA
PHKGFPVVLDSPRDGNLKDFPIKQLLGPDFGYVTREPLFETVTSLDSFGNLEVSPPVTVN
GKAYPLGRILIGSSFPLSGGRRMTKVVRDFLQAQQVQAPVELYSDWLTVGHVDEFMTFVP
IPGKKEFRLLMASTSACYQLFREKQKEGHGEAIMFKGLGGMSSKRITINKILSNESLTQE
NQYFQRCLDWNRDILKKELALTEKDIIDLPALFKMDEDRQARAFFPNMVNMIVLDKDLGI
PKPFGPQVEEECCLETHVRGLLEPLGLACTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW
WHMVP
Download sequence
Identical sequences F1LPA6
ENSRNOP00000010183

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