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Domain assignment for ENSRNOP00000012026 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000012026
Domain Number 1 Region: 750-884
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 5.34e-47
Family VBS domain 0.00000766
Further Details:      
 
Domain Number 2 Region: 137-273
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 3.14e-42
Family VBS domain 0.031
Further Details:      
 
Domain Number 3 Region: 30-119
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 1.46e-20
Family VBS domain 0.018
Further Details:      
 
Domain Number 4 Region: 381-467
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.00000000000000641
Family I/LWEQ domain 0.0092
Further Details:      
 
Domain Number 5 Region: 916-1044
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.0000000091
Family VBS domain 0.012
Further Details:      
 
Domain Number 6 Region: 608-726
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.0000000895
Family VBS domain 0.063
Further Details:      
 
Domain Number 7 Region: 495-571
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.0000832
Family VBS domain 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000012026   Gene: ENSRNOG00000018373   Transcript: ENSRNOT00000012026
Sequence length 1131
Comment pep:novel chromosome:Rnor_5.0:8:77377033:77455788:-1 gene:ENSRNOG00000018373 transcript:ENSRNOT00000012026 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDLKIDVSQEAIQQPLNVFLKFSQHHLGTRVAARETAQALKTLAQAARGVAASTNDPEAA
HAMLDSARDVMEGSAMLIQEAKQALIAPGDTESQQRLAQVAKAVSHSLNNCVNCLPGQKD
VDVALKSIGESSKKLLVDSLPPSTKPFQEAQSELNQAAADLNQSAGEVVHATRGQSGELA
AASGKFSDDFDEFLDAGIEMAGQAQTKEDQMQVIGNLKNISMASSKLLLAAKSLSVDPGA
PNAKNLLAAAARAVTESINQLIMLCTQQAPGQKECDNALRELETVKGMLENPNEPVSDLS
YFDCIESVMENSKVLGESMAGISQNAKTGDLPAFGECVGIASKALCGLTEAAAQAAYLVG
ISDPNSQAGHQGLVDPIQFARANQAIQMACQNLVDPGSSPSQVLSAATIVAKHTSALCNA
CRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEDNRNKCRIATTPLIEA
VENLTAFASNPEFASIPAQISSEGSQAQEPILVSAKTMLESSSYLIRTARSLAINPKDPP
TWSVLAGHSHTVSDSIKSLITSIRDKAPGQRECDYSIDGINRCIRDIEQASLAAVSQSLA
TRDDISVEALQEQLTSVVQEIGHLIDPIATAARGEAAQLGHKVTQLASYFEPLILAAVGV
ASKMLDHQQQMTVLDQTKTLAESALQMLYAAKEGGGNPKAQHTHDAITEAAQLMKEAVDD
IMVTLNEAASEVGLVGGMVDAIAEAMSKLDEGTPPEPKGTFVDYQTTVVKYSKAIAVTAQ
EMMTKSVTNPEELGGLASQMTTDYGHLALQGQMAAATAEPEEIGFQIRTRVQDLGHGCIF
LVQKAGALQVCPTDSYTKRELIECARSVTEKVSLVLSALQAGNKGTQACITAATAVSGII
ADLDTTIMFATAGTLNAENGETFADHRENILKTAKALVEDTKLLVSGAASTPDKLAQAAQ
SSAATITQLAEVVKLGAASLGSNDPETQVVLINAIKDVAKALSDLIGATKGAASKPADDP
SMYQLKGAAKVMVTNVTSLLKTVKAVEDEATRGTRALEATIEYIKQELTVFQSKDIPEKT
SSPEESIRMTKGITMATAKAVAAGNSCRQEDVIATANLSRKAVSDMLIACK
Download sequence
Identical sequences ENSRNOP00000012026

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