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Domain assignment for ENSRNOP00000017727 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000017727
Domain Number 1 Region: 832-940
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 4.19e-24
Family Spermadhesin, CUB domain 0.0023
Further Details:      
 
Domain Number 2 Region: 312-433
Classification Level Classification E-value
Superfamily Growth factor receptor domain 7.53e-19
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 3 Region: 32-166
Classification Level Classification E-value
Superfamily Growth factor receptor domain 1.13e-16
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 4 Region: 674-829
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000882
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 5 Region: 275-319
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000176
Family EGF-type module 0.016
Further Details:      
 
Domain Number 6 Region: 206-249
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000167
Family EGF-type module 0.028
Further Details:      
 
Domain Number 7 Region: 165-203
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000353
Family EGF-type module 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000017727   Gene: ENSRNOG00000010617   Transcript: ENSRNOT00000017727
Sequence length 1018
Comment pep:known chromosome:Rnor_5.0:7:124490468:124608680:-1 gene:ENSRNOG00000010617 transcript:ENSRNOT00000017727 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGAAAVRWHLCLLLALGARGQLVGGSGLPGAVDVDECSEGTDDCHIDAICQNTPKSYKCL
CKPGYKGEGKQCEDIDECENDYYNGGCVHDCINIPGNYRCTCFDGFMLAHDGHNCLDVDE
CQDNNGGCQQICVNAMGSYECQCHSGFFLSDNQHTCIHRSNEGMNCMNKDHGCAHICRET
PKGGVACDCRPGFDLAQNQKDCTLTCNYGNGGCQHSCEDTDTGPMCGCHQKYALHADGRT
CIEKDEAAIERSQFNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVG
FTLQPDGKTCKDINECLMNNGGCDHFCRNTVGSFECGCQKGHKLLTDERTCQDIDECSFE
RTCDHICINSPGSFQCLCHRGYILYGTTHCGDVDECSMNNGSCDQGCVNTKGSYECVCPP
GRRLHWNRKDCVEMSGCLSRSKASAQAQLSCGKVGGVENCFLSCLGQSLFMPDSETSYIL
SCGVPGLQGKAPPKRNGTSSSVGPGCSDAPTTPIRQKARFKIRDAKCHLRPRSQERAKDT
LRHPLLDNCHVTFVTLKCDSSKKRRRGRKSPSKEVSHITAEFEVEMKVEEASGSCEADCM
RKRAEQSLQAAIKTLRKSIGRHQFYVQVSGTEYEVAQRPAKAPEGTGTCGIGQILQDGKC
VPCAPGTYFSSEPGQCVPCVSGTYQDMEGQLSCTPCPSSEGLGLAGARNVSECGGQCSPG
FFSEDGFKPCQACPVGTYQPEPGRTGCFPCGGGLLTKQTGTASFQECEAKVHCSPGHHYN
TTTHRCIRCPVGTYQPEFGQNHCISCPGNTSTDFDGSTNVTHCKNQHCGGELGDYTGYIE
SPNYPGDYPANAECVWHIAPPPKRRILIVVPEIFLPIEDECGDVLVMRKSASPTSVTTYE
TCQTYERPIAFTSRSRKLWIQFKSNEANSGKGFQVPYVTYDEDYQQLIEDIVRDGRLYAS
ENHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRPYK
Download sequence
Identical sequences F1M987
10116.ENSRNOP00000017727 ENSRNOP00000017727 ENSRNOP00000017727 NP_001128356.1.100692 NP_001128356.1.4139

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