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Domain assignment for ENSRNOP00000019487 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000019487
Domain Number 1 Region: 388-490
Classification Level Classification E-value
Superfamily SRCR-like 3.27e-40
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0000835
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000019487
Domain Number - Region: 64-112
Classification Level Classification E-value
Superfamily Mediator hinge subcomplex-like 0.0128
Family MED7 hinge region 0.0093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000019487   Gene: ENSRNOG00000014398   Transcript: ENSRNOT00000019487
Sequence length 492
Comment pep:known chromosome:Rnor_5.0:15:52819510:52910547:1 gene:ENSRNOG00000014398 transcript:ENSRNOT00000019487 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MMDNKAMYLHTVSDRDNGSIFEEPFDGRSLSKLNLCEDGPCHKRRAGGCCTQLGSLSALK
HAVLGLYLLVFLTLVGVFILAVSRPRSSPDDLKALTRNINRLNESFRDMQLRLLQAPLQA
DLTEQVWKVQDALQNQTDSLLALAGLVQRLEGTLWGLHAQAAQTEQAVALLRDRTGQQSD
SAQLELYQLQVESNRSQLLLQRHAGLLDGLAHRVGVLGEELADVGGALRGLNHSLSYDVA
LHSTWLQDLQVLVSNASADTRRMRLVHMDMEMQLKQELATLNVVTEDLRLKDWEHSIALR
NITLAKGPPGPKGDQGNEGKEGKPGSPGLPGSRGLPGERGDPGMPGPKGDDGKLGATGPM
GMRGFKGERGPKGEKGERGERAGDMDFTMIRLVNGSGPHQGRVEVFHDRRWGTVCDDGWD
KKDGDVVCRMLGFHSVEEVHRTARFGQGTGRIWMDDVNCKGTESSIFHCQFSKWGVTNCG
HAEDAGVTCTAL
Download sequence
Identical sequences 10116.ENSRNOP00000046929 NP_001129327.1.100692 NP_001129327.1.4139 ENSRNOP00000019487 ENSRNOP00000019487

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