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Domain assignment for ENSRNOP00000025138 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000025138
Domain Number 1 Region: 306-484
Classification Level Classification E-value
Superfamily LigT-like 1.59e-19
Family 2'-5' RNA ligase LigT 0.019
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000025138
Domain Number - Region: 11-32
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00201
Family CCCH zinc finger 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000025138   Gene: ENSRNOG00000018621   Transcript: ENSRNOT00000025138
Sequence length 485
Comment pep:known_by_projection chromosome:Rnor_5.0:1:74825506:74827023:-1 gene:ENSRNOG00000018621 transcript:ENSRNOT00000025138 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEASADSSEASAACRFFLEGRCRFGARCRQPHPGAPAPSPEVAQPEARSKKPALRTAADV
IRRIRWDPRLDPADFSVGYTDRFLGVQEEPFCAFCWDEPLAALGPGVLAVPQHRIRYFRF
RGRLVWDRASRTDLIFGSGSVAGRGPTILDALDDRDEHWREVKAEIPDTEKTGVGFEDLD
TQGAPEEGGGNPTTTGLDTGLETQEEGGAIKETRTGLDSGLETPEVDGPTKETVLNGTTE
LETPDPSICCSGVKEISVQVPKATVLSQWQVQVLETSGLSADEMESVWDPGAWPDDRRAP
RKPRPTHFVALMVTEPGLRAEVVKAQEHLVRIAPYCAEFLVPAQALHLTVVLLRITGPGE
EAAAVRALRRAILKPGLQAPSELQFRDLILLGHHVLCATPSPTLASMVQTLNQRLEAEGL
RVVQLPELQPHLTLAKVPHGTQVCLPKPEYILNEELGRQPLEKLWLCRMGRAGQSYLPLA
QIPLN
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Identical sequences D3ZWP2
ENSRNOP00000025138

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