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Domain assignment for ENSRNOP00000028847 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000028847
Domain Number 1 Region: 373-646
Classification Level Classification E-value
Superfamily Kelch motif 1.96e-43
Family Kelch motif 0.0031
Further Details:      
 
Domain Number 2 Region: 786-932
Classification Level Classification E-value
Superfamily C-type lectin-like 1.12e-23
Family C-type lectin domain 0.0035
Further Details:      
 
Domain Number 3 Region: 131-253
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.44e-22
Family Spermadhesin, CUB domain 0.0021
Further Details:      
 
Domain Number 4 Region: 1066-1112
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000331
Family Laminin-type module 0.0077
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000028847
Domain Number - Region: 102-134
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00107
Family EGF-type module 0.015
Further Details:      
 
Domain Number - Region: 252-288
Classification Level Classification E-value
Superfamily EGF/Laminin 0.067
Family EGF-type module 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000028847   Gene: ENSRNOG00000021240   Transcript: ENSRNOT00000028847
Sequence length 1432
Comment pep:known chromosome:Rnor_5.0:3:129934530:130067263:1 gene:ENSRNOG00000021240 transcript:ENSRNOT00000028847 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVAAAAAAEATEARLRGYTTATAAPAGWKERQHRPCAATGAWRPWPRAGLCLPRVLSRAL
SPPPLLPLLPLLFSLLLLPLPREAEAAAVAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQ
CVCPTGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNKIMRLRFNHF
ATECSWDHLYVYDGDSIYAPLIAAFSGLIVPERDGNETAPEVTVTSGYALLHFFSDAAYN
LTGFNITYNFDMCPNNCSGRGECKSSNSSSTVECECSENWKGESCDIPHCTDNCGFPHRG
ICNASDTRGCSCFPHWQGPGCSIPVPANQSFWTREEYSDLKLPRASHKAVVNGNIMWVVG
GYMFNHSDYSMVLAYDLASREWLSLNHSVNSVVVRYGHSLALHKDKIYMYGGKIDSTGNV
TNELRVFHIHNESWVLLTPKAKDQYAVVGHSAHIVTLSSGRVVMLVIFGHCPLYGYISVV
QEYDLEKNTWSILQTQGALVQGGYGHSSVYDHRTKALYVHGGYKAFSANKYRLADDLYRY
HVDTQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIAC
DRWSVLPRPELHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDVLVFTSEQCDAHRSEAAC
VAAGPGIRCLWDTQSSRCTSWELATEEQAEKLKSECFSKRTLDHDRCDQHTDCYSCTANT
NDCHWCNDHCVPVNHSCTEGQISIAKYDNCPKDNPMYYCNKKTSCRSCALDQNCQWEPRN
QECIALPENICGIGWHLVGNSCLKITTAKENYDNAKLSCRNHNAFLASLTSQKKVEFVLK
QLRLMQSSQSTSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILS
EPSTRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGECTSSSSECMWCSNMKQ
CVDSNAYVASFPFGQCMEWYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCI
EGSYKGPVKMPSHASTGNVYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSIC
EKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGEEC
QLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFI
NASKNFNLNITWATSFPAGTQTGEEVPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYV
SNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLL
REMQQMASRPFASVNVALETDEEPPDLIGGSIKTVPKPIALEPCFGNKAAVLSVFVRLPR
GLGGIPPPGQSGLAVASALVDISQQMPIVYKEKSGAVRNRKQQPPAQPGTCI
Download sequence
Identical sequences Q99J86
ENSRNOP00000028847 10116.ENSRNOP00000028847 NP_112641.1.100692 NP_112641.1.4139 ENSRNOP00000028847

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