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Domain assignment for ENSRNOP00000037788 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000037788
Domain Number 1 Region: 26-98
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.00000000000011
Family Cold shock DNA-binding domain-like 0.00066
Further Details:      
 
Domain Number 2 Region: 146-189
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000000134
Family Retrovirus zinc finger-like domains 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000037788   Gene: ENSRNOG00000025938   Transcript: ENSRNOT00000034485
Sequence length 271
Comment pep:novel chromosome:Rnor_5.0:20:52098670:52176647:-1 gene:ENSRNOG00000025938 transcript:ENSRNOT00000034485 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAEGGAGKGEEPEKLPELAEDESQVLRGTGHCKWFNVRMGFGFISMISREGNPLDIPVDV
FVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESIRVTGPGGNPCLGSERRPKGKTLQKR
KPKADRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECGLPPQPKKCHYCQSIM
HMVANCPHKLVAQLPASAQGRPEAESQPCTSPSPREVGGGHGCTVPFPQEVTSEMAEQSD
RSPQEVSATKAFAAIGEQNKKGPLIQKRKKT
Download sequence
Identical sequences D3ZIK1
ENSRNOP00000037788 ENSRNOP00000037788 XP_001069344.2.100692 XP_002725925.1.4139 XP_006223991.1.4139 XP_006256663.1.100692 10116.ENSRNOP00000037788

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