SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSRNOP00000040714 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSRNOP00000040714
Domain Number 1 Region: 1-308
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 1.19e-81
Family Rhodopsin-like 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000040714   Gene: ENSRNOG00000049455   Transcript: ENSRNOT00000049758
Sequence length 312
Comment pep:known chromosome:Rnor_5.0:8:17908500:17909438:-1 gene:ENSRNOG00000049455 transcript:ENSRNOT00000049758 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MELKNQTAVSEFHLLGLTENHKLLPLIFIMFLSMYLITVLGNLIIILAISSGSQLHTPMY
LFLSILSINDICYSTVTIPKMLVNIQAHDDSISYIECLSQICFVSIFGGMENFLLAVMAY
DRYVAICKPLRYTVIMNPIFCALMILFSLFFSIMDALLHSLMVLRLSFCTELEIPHFFCE
LAQIIKLACSDTFLNNFLIFVAAFVFGGGPVCGIVFSYIYIVSSVLRMPSSGGKHRAFST
CASHLSVVSLFYGTGFGVYISSAVTDSLRNTAMASMMYSVVPPLLNPFIYSLRNREMKKA
LRTLVGRLIYLV
Download sequence
Identical sequences D4ABS4
NP_001000884.1.100692 NP_001000884.1.4139 ENSRNOP00000040714 10116.ENSRNOP00000040714 ENSRNOP00000040714

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]