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Domain assignment for ENSRNOP00000044293 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000044293
Domain Number 1 Region: 660-854
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 0.00000000000759
Family Multidrug efflux transporter AcrB transmembrane domain 0.014
Further Details:      
 
Domain Number 2 Region: 272-421
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 0.00000000249
Family Multidrug efflux transporter AcrB transmembrane domain 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000044293   Gene: ENSRNOG00000003675   Transcript: ENSRNOT00000044129
Sequence length 888
Comment pep:known chromosome:Rnor_5.0:X:42866040:42917474:1 gene:ENSRNOG00000003675 transcript:ENSRNOT00000044129 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSYQKANMLDQHHTDLILKLHT
AVTKIQVPRPGFNYTFAHICVLNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVKLF
QKSNSKVKIYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAEVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAILFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTAEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAHQKYFNNYSPVIGFYIYESIEYWNSSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STDLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLFPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMLDIDSTRVVDQITTV
Download sequence
Identical sequences 10116.ENSRNOP00000044293 ENSRNOP00000044293 ENSRNOP00000004882 NP_001178663.1.100692 NP_001178663.1.4139

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