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Domain assignment for ENSRNOP00000052093 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000052093
Domain Number 1 Region: 312-362,461-542,718-931,960-1030
Classification Level Classification E-value
Superfamily ARM repeat 1.7e-24
Family Armadillo repeat 0.094
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000052093
Domain Number - Region: 169-274,321-436
Classification Level Classification E-value
Superfamily ARM repeat 0.0892
Family PBS lyase HEAT-like repeat 0.075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000052093   Gene: ENSRNOG00000007341   Transcript: ENSRNOT00000055219
Sequence length 1048
Comment pep:known chromosome:Rnor_5.0:3:158321285:158386288:1 gene:ENSRNOG00000007341 transcript:ENSRNOT00000055219 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPLPRRGGEPRLAGARVVRTSLPRATPRSPKRVGRGAPLLSHAQRLTRRRHSSEQVPPEP
EHADFRSGKWLQERAGGDARDLRHTPLARMGSRQRVSGTEEVVIPCASDSDSGSVDLQLS
NLDDIHKGGPSVEFADSDISDIPILPQESLPDNLRSPTLQEPLSEASVERLVQSIQEVLH
GDLKGELQKLKFLRSLSSLSQTIPYDESTESFIHRHTAEIVHILTVLVQEEPLHSLNSLV
RQEVFVTITDLSYRDVHLLFGSEDREDLLGLITKSMMSLPAICTPIQLPRIVSNQAIQQE
CLYRGTFETFSVMLQSLVVKDPHLEIFDSIFKHIDPWLQSDRDHERERATFVMAKVLKCL
SSYLSPKLPLQFHRLGHLVAVMALLCGDPHKEVAEEAAEGTHYLLHITLRLKYITQDRDS
GKNLRETVKKCRELLEQYNLKGFYCCPFKIVQVFEVFLDSKELGQFIMTVLDSLKSLPHP
YIQQTAGELLITLVKSAEARFEKVPEIIGVICARLSIITLASVRQQIINTVSLFVSRPKY
TDIVLSHLLCHPVPYDRHLAELWRTLEVELSSTTWVLWRLLRKLQKCHDGPTQEKMAYVA
VAVTDALYEVLMGNKLRAAAFRLFPQLLMTLLIQIHHSIGLTMSDVSIPSGLYAEQEIPT
EVTPLCFAIQATKTLLLRTLCWQEFSIMEKNGGWTLLKGEGHLQGVFLLANALMERSHLF
AYKIMYLLVPLINRGNDKHKITSAGFFVELLRSPMARRLPRVYSTIRLKTWLNEESKLFR
ILALRGLRNLVGHREMREDIKSLLPCILNSLYETDERIILLAIQILLQLVRTLDSSTLAT
MMKTLLSLFGDVRQDVHRFSMTLFGASIKAVKHTEKKSVEDQVLESLVPLLLFSQDENDA
IAKESRRVLTLCARFLNWKLPREVYCKDPLYIKPNEVRRVCKFFGERSKGKIDILDQTLT
YSKDPKLPIRRTAVLFVGLLSNYVDASELKRKGTDWIENDLRELLQDPEPSLRIIASQAL
FRIQRVGNIPETEISVSWMRKLLGCLHT
Download sequence
Identical sequences D3ZA82
ENSRNOP00000052093 XP_003753870.1.4139 XP_006224788.1.4139 XP_006224789.1.4139 XP_006235452.1.100692 XP_008760646.1.100692 XP_008760647.1.100692 ENSRNOP00000052093 10116.ENSRNOP00000052093

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