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  Home > Genomes > Rattus norvegicus 76_5.0 > ENSRNOP00000053937

Domain assignment for ENSRNOP00000053937 from Rattus norvegicus 76_5.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000053937
Domain Number 1 Region: 930-1038
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.14e-34
Family Spermadhesin, CUB domain 0.00028
Further Details:      
 
Domain Number 2 Region: 231-346
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 5.5e-34
Family Spermadhesin, CUB domain 0.0005
Further Details:      
 
Domain Number 3 Region: 1281-1390
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.83e-32
Family Spermadhesin, CUB domain 0.00045
Further Details:      
 
Domain Number 4 Region: 68-172
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.49e-32
Family Spermadhesin, CUB domain 0.00046
Further Details:      
 
Domain Number 5 Region: 1453-1561
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.66e-32
Family Spermadhesin, CUB domain 0.00052
Further Details:      
 
Domain Number 6 Region: 1619-1738
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-31
Family Spermadhesin, CUB domain 0.00097
Further Details:      
 
Domain Number 7 Region: 750-866
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.36e-28
Family Spermadhesin, CUB domain 0.00073
Further Details:      
 
Domain Number 8 Region: 1807-1911
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.88e-26
Family Spermadhesin, CUB domain 0.0015
Further Details:      
 
Domain Number 9 Region: 410-519
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 7.59e-26
Family Spermadhesin, CUB domain 0.0011
Further Details:      
 
Domain Number 10 Region: 583-692
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 6.02e-25
Family Spermadhesin, CUB domain 0.001
Further Details:      
 
Domain Number 11 Region: 1098-1213
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 6.54e-25
Family Spermadhesin, CUB domain 0.0034
Further Details:      
 
Domain Number 12 Region: 2514-2585
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5.8e-21
Family Complement control module/SCR domain 0.00088
Further Details:      
 
Domain Number 13 Region: 2159-2227
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.97e-19
Family Complement control module/SCR domain 0.00085
Further Details:      
 
Domain Number 14 Region: 2216-2284
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.43e-18
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 15 Region: 2455-2525
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5e-18
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 16 Region: 2275-2341
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5.4e-18
Family Complement control module/SCR domain 0.00098
Further Details:      
 
Domain Number 17 Region: 2398-2466
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5.98e-18
Family Complement control module/SCR domain 0.00097
Further Details:      
 
Domain Number 18 Region: 2574-2643
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 3.37e-16
Family Complement control module/SCR domain 0.0012
Further Details:      
 
Domain Number 19 Region: 1973-2040
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 6.95e-16
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 20 Region: 2633-2704
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000104
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 21 Region: 1566-1635
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000134
Family Complement control module/SCR domain 0.00094
Further Details:      
 
Domain Number 22 Region: 2330-2391
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000445
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 23 Region: 1911-1984
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000181
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 24 Region: 2100-2160
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000222
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 25 Region: 352-412
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000027
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 26 Region: 1394-1456
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000031
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 27 Region: 870-934
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000351
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 28 Region: 1220-1286
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000417
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 29 Region: 1043-1108
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000917
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 30 Region: 6-65
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000001
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 31 Region: 525-587
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000306
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 32 Region: 696-758
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000945
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 33 Region: 177-245
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000243
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 34 Region: 2047-2111
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000584
Family Complement control module/SCR domain 0.0023
Further Details:      
 
Domain Number 35 Region: 1737-1800
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000499
Family Complement control module/SCR domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000053937   Gene: ENSRNOG00000004937   Transcript: ENSRNOT00000057108
Sequence length 2720
Comment pep:novel chromosome:Rnor_5.0:7:86716233:87187949:-1 gene:ENSRNOG00000004937 transcript:ENSRNOT00000057108 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
XIEKESCGDPGTPLYGIREGDGFSNRDVLRFECQFGFELIGEKSIVCQENNQWSANIPIC
IFPCLSNFTAPMGTVLSPDYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAV
KDGDSPDSPILGTFTGAEVPSHLTSNSHILRLEFQADHSMSGRGFNITYNTFGHNECPDP
GIPINARRFGDNFQLGSSISVICEEGFIKTQGTETITCILMDGKVMWSGPIPRCGAPCGG
HFSAPSGVILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELNYDVLEVHDGPNL
LSPLLGSYNGTQVPQFLFSSSNFIYLLFTTDNSRSNNGFKIHYESVTVNTYSCLDPGIPV
HGRRYGHDFSIGSTVSFSCDPGYRLSHEEPLLCEKNHWWSHPLPTCDALCGGDVRGPSGT
ILSPGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLEDHHDYLLITENGSFTQPLARLT
GSELPSTINAGLYGNFRAQLRFISDFSISYEGFNITFSEYNLEPCEDPGIPQYGSRVGFS
FGVGDTLTFSCSLGYRLEGSSEIICLGGGRRVWSAPLPRCVAECGASATNNEGILLSPNY
PLNYENNHECIYSLQVQAGKGINISARTFHLAQGDVLKIYDGKDKTTHLLGAFTGASMRG
LTLSSTSNQLWLEFNSDSEGTDEGFQLVYTSFELSHCEDPGIPQFGYKISDQGHFAGSTI
IYGCNPGYTLHGSSLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDN
NLRCMWMIEVDPGNIVSLQFLAFDTEASHDILRVWDGPPENEMLLKEVSGSLIPDGIHST
LNIVTIQFDTDFYISKSGFAIQFSSSVATACRDPGVPMNGTRNGDGREPGDTVVFQCDPG
YELQGQERITCIQVENRYFWQPSPPVCIAPCGGNLTGSSGFILSPNFPHPYPHSRDCDWT
VSVNADYVISLAFISFSIEPNYDFLYIYDGPDSNSPLIGSFQDSKLPERIESSSNTMHLA
FRSDGSVSYTGFHLEYKAKLRESCFDPGNIMNGTRLGMDYKLGSTVTYYCDAGYVLQGYS
TLTCIMGDDGRPGWNRVLPSCHAPCGSRSTGSEGTVLSPNYPKNYSVDHNCVYSIAVPKE
FVVFGQFVFFQTSLHDVVEVFDGPTQQSPLLSSLSGSHSGESLPLSSGNQITIRFTSVGP
ITAKGFHFVYQAVPRTSSTQCSSVPEPRFGRRIGNDFAVGSLVLFECNPGYILHGSRAIR
CETVPNSLAQWNDSLPTCIVPCGGILTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGI
QVQIVSFATEHNWDSLDFYDGGDNNAPRLGSYSGTTIPHLLNSTSNNLYLNFQSDISVSA
AGFHLEYTAIGLDSCPEPQTPSSGIKVGDRYMVGDVVSFQCDQGYSLQGHSHITCMPGPV
RRWNYPIPICLAQCGGAMSDFSGVILSPGFPGNYPSSLDCTWTIRLPIGFGVHLQFVNFS
TETIHDYLEVRSGSSELSTVIGRLSGPQIPSSLFSTTHETSLYFHSDYSQNKQGFHIVYQ
AYQLQSCPDPRPFRNGFVIGNDFTVGQTISFECFPGYTLIGNSALTCLHGVSRNWNHPLP
RCEALCGGNITAMNGTIYSPGYPDEYPNFQDCFWLVRVPPGNGIYINFTVLQTEPIYDFI
TVWDGPDQNSPQIGQFSGNTALESVYSTSNQILIKFHSDFTTSGFFVLSYHAYQLRVCQP
PPPVPNAEILTEDDEFEIGDIIRYQCLPGFTLVGNAILTCRLGERLQMDGAPPVCQVLCP
ANELRLDSTGVILSPGYPDSYPNLQMCAWSISVEKGYNISMFVEFFQTEKEFDVLQVYDG
PNIQSPVLISLSGDYSAAFNVTSNGHEVFLQWSADHGNNKKGFRIRYIAFYCSTPESPPH
GYIISQTGGQLNSVVRWACDRGFRLVGKSSAVCRKSSYGYHSWDAPVPACQAISCGIPKA
PTNGGILTTDYLVGTRVTYFCNDGYRLSSKELTTATCQSDGTWSNHNKTPRCVVVTCPSI
NSFTLEHGRWRIVNGSHYEYKTKVVFSCDPGYHGLGPASIECLPNGTWSWRTERPYCQII
SCGELPTPPNGNKIGTQTSYGSTAIFTCDLGFMLVGSAVRECLSSGLWSGSETRCLAGHC
GIPDLIVNGQVIGENYGYRDTVVYQCNPGFRLIGSSVRICQQDHNWSGQLPSCVPVSCGH
PGSPIYGRTSGNGFNFNDVVTFSCNIGYLMQGPTKAQCQANRQWSHPPPVCKVVNCSDPG
IPANSKRESKIEHGNFTYGTVVFYDCNPGYFLFGSSVLICQPNGQWDKPLPECIMIDCGH
PGIPPNAVLSGEKYTFGSTVHYSCTGKRSLLGQASRTCQLNGHWSGSQPHCSGDTTGTCG
DPGMPGHGSRQESDFRTKSTVRFACDTGYILYGSEERTCLSNGSWTGRQPECKAVQCGNP
GTTANGKVFRIDGTTFSSSVIYSCMEGYILSGPSVRQCTANGTWSGNLPNCTIISCGDPG
IPANGLRYGDDFVVGQNVSYMCQPGYTMELNGSRVRTCTTNGTWSGVMPTCRAVTCSTPP
QISNGRLEGTNFDWGFSISYICSAGYELSFPAVLTCVGNGTWSGEVPQCLPKFCGDPGIP
SQGKREGKSFIYQSEVSFSCNSPFILVGSSTRLCQTDGTWSGSSPHCIEPTRTSCENPGV
PRHGSQNNTFGFQVGTILLF
Download sequence
Identical sequences ENSRNOP00000053937

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.