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Domain assignment for ENSRNOP00000059432 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000059432
Domain Number 1 Region: 632-670
Classification Level Classification E-value
Superfamily SAP domain 0.000000403
Family SAP domain 0.0024
Further Details:      
 
Domain Number 2 Region: 921-965
Classification Level Classification E-value
Superfamily EF-hand 0.0000273
Family Calmodulin-like 0.064
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000059432
Domain Number - Region: 143-204
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.000283
Family Cold shock DNA-binding domain-like 0.0073
Further Details:      
 
Domain Number - Region: 1036-1129
Classification Level Classification E-value
Superfamily Tropomyosin 0.000785
Family Tropomyosin 0.008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000059432   Gene: ENSRNOG00000000397   Transcript: ENSRNOT00000067004
Sequence length 1148
Comment pep:known chromosome:Rnor_5.0:20:34157349:34199950:-1 gene:ENSRNOG00000000397 transcript:ENSRNOT00000067004 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAQFGGQKNPPWATQFTATAVSQPAALGVQQPSLLGASPTIYTQQTALAAAGLTTQTPAN
YQLTQTAALQQQAAAVLQQQYSQPQQALYSVQQQLQQPQQTILTQPAVALPTSLSLSTPQ
PAAQITVSYPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQLGAVKGKTPQVG
DRVLVEATYNPNMPFKWNAQRIQTLPNQNQSQTQPLLKTPTAVIQPIVPQTTFGVQAQPQ
PQSLLQAQISAASITPLLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQPARRLDPPSRFSG
RNDRGDQVPNRKDDRSRERDRERRRSRERSPQRKRSRERSPRRERERSPRRVRRVVPRYT
VQFSKFSLDCPSCDMMELRRRYQNLYIPSDFFDAQFTWVDAFPLSRPFQLGNYCNFYVMH
REVESLEKNVAVLDPPDADHLYSAKVMLMASPSMEDLYHKSCALAEDPQDLRDGFQHPAR
LVKFLVGMKGKDEAMAIGGHWSPSLDGPNPEKDPSVLIKTAIRCCKALTGIDLSVCTQWY
RFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHCLPTRSEWETLSRGYKQQLVEKLQG
ERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMKVNDLRKELESRALSSKGLKSQLI
ARLTKQLKIEEQKEEQKELEKSEKEEEDEDDKKSEDDKEEEERKRQEEVERQRQERRYIL
PDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSLFAELFNEMLQRDFG
VRIYKSLLSLPEKEDKKDKEKKSKKEERKDKKEEREDDIDEPKPKRRKSGDDKDKKEDRD
ERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEEEEDDREEEEVNKRDDKRDVSRYC
KDRPSKDKEKEKPQMVTVNRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGLHLSRAQVKK
LLNKVVLRESCFYRKLTDTSKDGESHDEPESLQGDTTLGNRLLLPTPTVKQESKDGEENV
GLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDGKTILNLENSNKSLSGE
LREVKKDLGQLQENLKVSENMNLQFENQLNKTLRNLSTVMDDIHTVLKKDNVKNEDRDQK
SKENGSSV
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Identical sequences D4A2P1
ENSRNOP00000000447 10116.ENSRNOP00000000447 ENSRNOP00000059432 NP_001102005.1.100692 NP_001102005.1.4139

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