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Domain assignment for ENSRNOP00000060024 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000060024
Domain Number 1 Region: 895-1075
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.45e-39
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 2 Region: 482-686
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.76e-35
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 3 Region: 698-891
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.5e-34
Family Laminin G-like module 0.0063
Further Details:      
 
Domain Number 4 Region: 288-462
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.58e-32
Family Laminin G-like module 0.0039
Further Details:      
 
Domain Number 5 Region: 27-183
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.29e-29
Family Laminin G-like module 0.0053
Further Details:      
 
Domain Number 6 Region: 1113-1196
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.000015
Family Laminin G-like module 0.00016
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000060024
Domain Number - Region: 210-242
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000335
Family EGF-type module 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000060024   Gene: ENSRNOG00000021103   Transcript: ENSRNOT00000068571
Sequence length 1196
Comment pep:known chromosome:Rnor_5.0:1:228789673:228870881:1 gene:ENSRNOG00000021103 transcript:ENSRNOT00000068571 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MALGSRWRPPPQLPPLLLLLALVAGVRGLEFGGGPGQWARYARWAGAASTGELSFSLRTN
ATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHMVLLTRD
ARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLA
NLKLGERPPALLGSQGLRGAAADPLCAPARNPCANGGLCTVLAPGEVGCDCSHTGFGGKF
CSEGEPRQEGPAHLTLNSEVGSLLFSEGGAGRGGAGDVHQPTKGKEEFVATFKGNEFFCY
DLSHNPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEAL
VEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTISVDGILTTTGYTQEDYTM
LGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAKEGDPKMKLQG
DLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGA
GVGSHSSSQRADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRDGRKG
SISVNSRSTPFLATGESEVLDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRD
LFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAPCRNGGICREGWNRFVCDCIGTG
FLGRVCEREATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESADT
LRLELDGGQMKLTVNLDCLRVGCAPSAAGKGPETLFAGHKLNDNEWHTVRVVRRGKSLQL
SVDNVTVEGQMAGAHTRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCK
DGDITYCELNARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLF
NSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLK
IDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPD
LIADALHRIGQVERGCDGPPSTVNWLQCENSGVCSEWGFVCRCASLGAVSPLCREAGTTY
IFGKGGALITYTWPPNDRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI
Download sequence
Identical sequences ENSRNOP00000060024

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