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Domain assignment for ENSRNOP00000061460 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000061460
Domain Number 1 Region: 134-294
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.06e-54
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.0000387
Further Details:      
 
Domain Number 2 Region: 296-358
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.46e-16
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.00082
Further Details:      
 
Domain Number 3 Region: 54-102
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000488
Family EGF-type module 0.012
Further Details:      
 
Domain Number 4 Region: 97-136
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000524
Family EGF-type module 0.0061
Further Details:      
 
Domain Number 5 Region: 3-41
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000719
Family EGF-type module 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000061460   Gene: ENSRNOG00000033064   Transcript: ENSRNOT00000064991
Sequence length 362
Comment pep:novel chromosome:Rnor_5.0:2:17606363:17874823:1 gene:ENSRNOG00000033064 transcript:ENSRNOT00000064991 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GDICNPNPCENGGICLSGLADDSFSCECPDGFTDPNCSSVVEVASDEEKPTSAGPCIPNP
CHNGGTCEISEAYRGDTFIDYVCKCPQGFNGIHCQHNINECEAEPCRNGGICTDLVANYS
CECPGEFMGRNCQYKCSGPLGIEGGIISNQQITASSTHRALFGLQKWYPYYARLNKKGLI
NAWTAAENDRWPWIQINLQRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWAMYKV
KGTNEEMVFRGNVDNNTPYANSFTPPIKAQYVRLYPQICRRHCTLRMELFGCELSGCSEP
LGMKSGHIQDYQITASSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQLET
ML
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Identical sequences ENSRNOP00000061460

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