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Domain assignment for ENSRNOP00000061839 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000061839
Domain Number 1 Region: 137-415
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 6.42e-79
Family Nuclear receptor ligand-binding domain 0.00000000122
Further Details:      
 
Domain Number 2 Region: 84-163
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 4.64e-27
Family Nuclear receptor 0.0000113
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000061839   Gene: ENSRNOG00000024061   Transcript: ENSRNOT00000065435
Sequence length 455
Comment pep:known chromosome:Rnor_5.0:15:13963828:14306790:1 gene:ENSRNOG00000024061 transcript:ENSRNOT00000065435 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSSSSHACPVPAVRGHMTHYPAAPYPLLFPPVIGGLSLPPLHGLHGHPPPSGCSTPSPAT
IETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
IYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEM
TAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIV
EFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALK
IYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGH
EPLTPNSSGNTAEHSPSVSPSSVETSGVSQSPLLQ
Download sequence
Identical sequences ENSRNOP00000061839 XP_017455067.1.100692

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