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Domain assignment for ENSRNOP00000062961 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000062961
Domain Number 1 Region: 2-111
Classification Level Classification E-value
Superfamily C-type lectin-like 7.42e-43
Family Link domain 0.0026
Further Details:      
 
Domain Number 2 Region: 246-404
Classification Level Classification E-value
Superfamily C-type lectin-like 1.5e-42
Family C-type lectin domain 0.00000564
Further Details:      
 
Domain Number 3 Region: 104-223
Classification Level Classification E-value
Superfamily C-type lectin-like 2.92e-27
Family Link domain 0.0048
Further Details:      
 
Domain Number 4 Region: 405-463
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000876
Family Complement control module/SCR domain 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000062961   Gene: ENSRNOG00000029212   Transcript: ENSRNOT00000063821
Sequence length 507
Comment pep:known chromosome:Rnor_5.0:2:18363890:18441931:-1 gene:ENSRNOG00000029212 transcript:ENSRNOT00000063821 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GVVFHYRAATSRYTLNFESAQQACLDIGAVIATPEQLFAAYEDGFEQCDAGWLSDQTVRY
PIRAPREGCYGDMMGKEGVRTYGFRSPQETYDVYCYVDHLDGDVFHITAPSKFTFEEAEA
ECANRDARLATVGELHAAWRNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRF
ENQTCFPLPDSRFDAYCFKRPDLCKTNPCLNGGTCYPTETSYVCTCAPGYSGDQCELDFD
ECHSNPCRNGATCVDGLNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRT
WDAAERECRLQGAHLTSILSHEEQMFVNRVGHDYQWIGLNDKMFEHDFRWTDGSALQYEN
WRPNQPDSFFSAGEDCVVIIWHENGQWNDVPCNYHLTYTCKKGTVACGQPPVVENAKTFG
KMKPRYEINSLIRYHCKDGFIQRHLPTIRCLGNGRWAMPKITCMNPSAYQRTYSKKYLKN
SSSVKDNSINTSKHEHRWSRRWQETRR
Download sequence
Identical sequences D3ZFC3
ENSRNOP00000062961

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