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Domain assignment for ENSRNOP00000065023 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000065023
Domain Number 1 Region: 125-229
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 3.38e-22
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000065023   Gene: ENSRNOG00000048602   Transcript: ENSRNOT00000073100
Sequence length 391
Comment pep:novel chromosome:Rnor_5.0:4:245358112:245373401:1 gene:ENSRNOG00000048602 transcript:ENSRNOT00000073100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CDYSVLIPAAVKASPQVHSHSHIGRSRVHSGSRRSFFFRMKSSCTVPVKEEQRCSSCSKK
KDQRKFHTIHCTGYLRSWPPNVVGTEKEMGSGKDSGPLTCLVAMGRLQPYTVPPKNGKIN
VRPAEFITRFAMNGKFVYVDQSFKTRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHK
AVLQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLVLGRSETAVS
VPQCRSSQSSEASFTHTIVSEPLVHVSTVDTRGTMKYEVAFPWPGWRSQVAAVPLVTLHT
SVIAAHSVSSFGNCGMKXVSTGELFALSPETEGLEAARQHQSAEPAHCHKPLLSDSTQLG
FDALCDSDDTAMATFMNYLEAEGGLGDPGDF
Download sequence
Identical sequences ENSRNOP00000065023

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