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Domain assignment for ENSRNOP00000066041 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000066041
Domain Number 1 Region: 466-680
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.58e-107
Family Thrombospondin C-terminal domain 0.00000000113
Further Details:      
 
Domain Number 2 Region: 343-464
Classification Level Classification E-value
Superfamily TSP type-3 repeat 2.48e-37
Family TSP type-3 repeat 0.000000134
Further Details:      
 
Domain Number 3 Region: 2-54
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 1.09e-16
Family TSP-1 type 1 repeat 0.0000335
Further Details:      
 
Domain Number 4 Region: 274-345
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.0000000000000144
Family TSP type-3 repeat 0.00022
Further Details:      
 
Domain Number 5 Region: 202-286
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.00000000000366
Family TSP type-3 repeat 0.00014
Further Details:      
 
Domain Number 6 Region: 58-112
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000289
Family EGF-type module 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000066041   Gene: ENSRNOG00000045829   Transcript: ENSRNOT00000070912
Sequence length 681
Comment pep:known chromosome:Rnor_5.0:3:116415715:116422101:1 gene:ENSRNOG00000045829 transcript:ENSRNOT00000070912 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TVNGGWSPWSLWDICSVTCGGGVQRRSRLCNNPTPQFGGKDCVGDVTENQVCNKQDCPMD
GCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECKEVPDACFNHNGEHRCK
NTDPGYNCLPCPPRFTGSQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNKNAKCNYLGHY
SDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPNLPNSGQEDY
DKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPDQADTD
NNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQLDSDS
DRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDRDN
CRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDFRRFQMIPLDPKG
TSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDDDYAGFVFGY
QSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNALWHTGNTPGQ
VRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDKTYAGGRLG
LFVFSQEMVFFSDMKYECRDS
Download sequence
Identical sequences ENSRNOP00000066041

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