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Domain assignment for ENSRNOP00000007109 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000007109
Domain Number 1 Region: 218-399
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.2e-47
Family Nuclear receptor ligand-binding domain 0.0000000212
Further Details:      
 
Domain Number 2 Region: 147-218
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.26e-27
Family Nuclear receptor 0.0000216
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000007109   Gene: ENSRNOG00000005343   Transcript: ENSRNOT00000007109
Sequence length 430
Comment pep:known chromosome:Rnor_5.0:6:108576664:108616585:-1 gene:ENSRNOG00000005343 transcript:ENSRNOT00000007109 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEIKNSPSSLSSPASYNCSQSILPLEHGPIYIPSSYVDNRHEYSAMTFYSPAVMNYSVPG
STSNLDGGPVRQSTSPNVLWPTSGHLSPLATHCQSSLLYAEPQKSPWCEARSLEHTLPVN
RETLKRKLSGSSCASPVTSPNAKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGFVELSLLDQVRLLESCWMEVLM
VGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCV
KAMILLNSSMYPLASANQEAESSRKLTHLLNAVTDALVWVIAKSGISSQQQSVRLANLLM
LLSHVRHISNKGMEHLLSMKCKNVVPVYDLLLEMLNAHTLRGYKSSISGSECSSTEDSKN
KESSQNLQSQ
Download sequence
Identical sequences ENSRNOP00000007109

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