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Domain assignment for ENSRNOP00000008302 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000008302
Domain Number 1 Region: 365-626
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 6.03e-56
Family Nuclear receptor ligand-binding domain 0.0000000208
Further Details:      
 
Domain Number 2 Region: 293-370
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 6.22e-28
Family Nuclear receptor 0.0000143
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000008302   Gene: ENSRNOG00000005964   Transcript: ENSRNOT00000008302
Sequence length 628
Comment pep:known chromosome:Rnor_5.0:5:68298772:68339859:1 gene:ENSRNOG00000005964 transcript:ENSRNOT00000008302 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPCVQAQYSPSPPGSTYATQTYGSEYTTEIMNPDYAKLTMDLGSTGIMATATTSLPSFST
FMEGYPSSCELKPSCLYQMPPSGPRPLIKMEEGREHGYHHHHHHHHHHHHHHQQQQPSIP
PPSGPEDEVLPSTSMYFKQSPPSTPTTPGFPPQAGALWDDELPSAPGCIAPGPLLDPQMK
AVPPMAAAARFPIFFKPSPPHPPAPSPAGGHHLGYDPTAAAALSLPLGAAAAAGSQAAAL
EGHPYGLPLAKRTATLTFPPLGLTASPTASSLLGESPSLPSPPNRSSSSGEGTCAVCGDN
AACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMV
KEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPSPPSPPICMMNALVRALTDATPRDLDYSR
YCPTDQATAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELF
VLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLS
ALSMITERHGLKEPKRVEELCNKITSSLKDHQRKGQALEPSEPKVLRALVELRKICTQGL
QRIFYLKLEDLVSPPSVIDKLFLDTLPF
Download sequence
Identical sequences P51179
ENSRNOP00000008302 NP_113816.1.100692 NP_113816.1.4139 XP_017449093.1.100692 IGBMC-1014-000

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