SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSRNOP00000018751 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000018751
Domain Number 1 Region: 88-99,189-423
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.67e-50
Family Nuclear receptor ligand-binding domain 0.00024
Further Details:      
 
Domain Number 2 Region: 15-97
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.43e-27
Family Nuclear receptor 0.00016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000018751   Gene: ENSRNOG00000013232   Transcript: ENSRNOT00000018751
Sequence length 437
Comment pep:known chromosome:Rnor_5.0:3:28258302:28290763:-1 gene:ENSRNOG00000013232 transcript:ENSRNOT00000018751 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
METCSVSVPDDRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNC
VMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEF
EEEANHWSNHGDSDHSSPGNRVSESNQPSPGSTLSSRSVELNGFMTFRDQYMGMSVPPHY
QYIPHLFSYSGHSPLLPPQARSLDPQSYSLIHQLMSAEDLEPLGTPMLIEDGYAVTQAEL
FALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGE
LADVTAKYSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIR
GLSSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLP
LLFKVVLHSCKTSTVKE
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Identical sequences ENSRNOP00000018751

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