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Domain assignment for ENSRNOP00000028330 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000028330
Domain Number 1 Region: 32-137
Classification Level Classification E-value
Superfamily SRCR-like 0.00000000000000249
Family Scavenger receptor cysteine-rich (SRCR) domain 0.012
Further Details:      
 
Domain Number 2 Region: 269-369
Classification Level Classification E-value
Superfamily SRCR-like 0.0000000000000863
Family Scavenger receptor cysteine-rich (SRCR) domain 0.018
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000028330
Domain Number - Region: 165-270
Classification Level Classification E-value
Superfamily SRCR-like 0.000249
Family Scavenger receptor cysteine-rich (SRCR) domain 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000028330   Gene: ENSRNOG00000046935   Transcript: ENSRNOT00000028330
Sequence length 491
Comment pep:novel chromosome:Rnor_5.0:1:233715534:233735903:-1 gene:ENSRNOG00000046935 transcript:ENSRNOT00000028330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDSHEVLLAATYLLGTLGSLNGALKGVGVSGAQVMLSGSNSKCQGLVEVQMNGMKTVCSS
SWRLSQDLWKNANEASTVCQQLGCGNPLALGHLTLWNRPKNQILCQGPPWSFSNCSTSSL
GQCLPLSLVCLEPQKTTPLPTTTLPTTMPEPTAPPRLQLVPGHEGLRCTGVVEFYNGSRG
GTILYKAKARPVDLGNLICKSLQCGSFLTHLSRIETAGTPAPAELRDPRPLPIRWEAQNG
SCTSLQQCFQKTTVQEGSQALAVVCSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWAALCD
SSAARGPGRWEELCQEQQCGNLISFHVMDADRTSPGVLCTQEKLSQCYQLQKKTHCKRVF
ITCKDPNPVGLAPGTVASIILTLVLLVVLMVMCGPLIYKKLVKKFRQKKQRQWIGPTGVN
QSMSFHRSHTATVRSQVENPAASHVDNEYSQPPRNSRLSAYPALEGALHRSSTQPDNSSD
SDYDLQVAQRL
Download sequence
Identical sequences ENSRNOP00000028330

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