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Domain assignment for ENSRNOP00000052200 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000052200
Domain Number 1 Region: 311-505
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.8e-69
Family Nuclear receptor ligand-binding domain 0.0000226
Further Details:      
 
Domain Number 2 Region: 23-113
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.24e-29
Family Nuclear receptor 0.0000127
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000052200   Gene: ENSRNOG00000009329   Transcript: ENSRNOT00000055333
Sequence length 508
Comment pep:known chromosome:Rnor_5.0:10:86479868:86484723:-1 gene:ENSRNOG00000009329 transcript:ENSRNOT00000055333 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEDSSRVSPSKGTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQY
KRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQNAMNL
ANNQLSSLCPLETSPAPHPTSGSVGPSPPPAPAPTPLVGFSQFPQQLTPPRSPSPEPTVE
DVISQVARAHREIFTYAHDKLGTSPGNFNANHASGSPPATTPQCWESQGCPSTPNDNNLL
AAQRHNEALNGLRQGPSSYPPTWPSGPAHHSCHQPNSNGHRLCPTHVYSAPEGKAPANGL
RQGNTKNVLLACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQH
DQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEK
LNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPSETSRFT
KLLLKLPDLRTLNNMHSEKLLSFRVDAQ
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Identical sequences G3V9L8
ENSRNOP00000052200 NP_665718.2.100692 NP_665718.2.4139

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