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Domain assignment for ENSRNOP00000003545 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000003545
Domain Number 1 Region: 1-418
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.44e-92
Family L-arabinose binding protein-like 0.003
Further Details:      
 
Domain Number 2 Region: 523-732
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 0.0000432
Family Calcium ATPase, transmembrane domain M 0.032
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000003545
Domain Number - Region: 428-475
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0212
Family TNF receptor-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000003545   Gene: ENSRNOG00000002628   Transcript: ENSRNOT00000003545
Sequence length 768
Comment pep:known chromosome:RGSC3.4:1:71160395:71180865:1 gene:ENSRNOG00000002628 transcript:ENSRNOT00000003545 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEEINRNPDLLPNMSLVIKHTLSYCDGNTADHIFKEKFYKPLPNYVCNEETMCSFMLIGL
NWVLSLTLFKDLDIFSFPRFLQISYGPFHSIFSDNEQFPYLYQMTPKDTSLALAIVSFLL
YFNWNWVGLVISDNDEGNQFLSELKKETQNKEICFAFVNMMSIHEHSSYQKTEMYYNQIV
MSSTNIIIIYGKTNSIIELSFRMWVSPVIQRIWVTNSELDFPTSMRDFTHGTFYGTLTFL
HHHGEISGFTNFFETWDHLRSRDLNLLIPEWKYFSYDASGSNCKILRNYSSNASLEWITE
QKFHMAFNDYSHSIYNAVYAMAHALHETNLQEVDNKEIRNGKGASTHCLKVNSFLRKTHF
TNSHGERVIMKQRVRVQEDYDIVHIQNFSQHLRIKMKIGKFSPYFTHGGPFHLYEDMIQL
ATGSRKMPSSVCSADCSPGFRKSWKEGMAPCCFICSLCPENEISNETNMDQCVNCPEYQY
ANTEKNKCIQKDVIFLSYEDPLGMALALIAFCLSAFTAVVLWVFVKHHDTPIVKANNRIL
SYILIMSLMFCFLCSFFFIGHPNRGTCILQQITFGIVFTVAVSTVLAKTITVILAFKLRD
PGRSLRNFLVSGAPNYIIPICSLLQCILCAIWLAVSPPFVDIDEHSEHGHIMIVCNKGSI
MAFYCVLGYLACLALGSFTTAFLAKNLPDTFNEAKFLTFSMLVFCSVWVTFLPVYHSTRG
RVMVAVEIFSILASSAGMFGCIFAPKIYIILMKPERNSIQKFREKSYF
Download sequence
Identical sequences O35266
10116.ENSRNOP00000003545 ENSRNOP00000003545 NP_775437.1.100692

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