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Domain assignment for ENSRNOP00000013778 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000013778
Domain Number 1 Region: 48-538
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 8.41e-116
Family L-arabinose binding protein-like 0.00000698
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000013778
Domain Number - Region: 545-593
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0298
Family TNF receptor-like 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000013778   Gene: ENSRNOG00000010268   Transcript: ENSRNOT00000013777
Sequence length 912
Comment pep:known chromosome:RGSC3.4:2:153854376:153889748:1 gene:ENSRNOG00000010268 transcript:ENSRNOT00000013777 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASQKICLALGFLAFLWAELGAQNKTEELQCRLMAKFNLSGYVDAKNHSLVIAGLFPIHS
RIIPVDESILEPVSPMCEGFNFRGFRWMKTMIHTIKEINARKDILPNHTLGYQIFDSCYT
ISKAMESSLVFLTGQEEFKPNFRNSTGSTLAAMVGAGGSSLSVAASRILGLYYMPQVGYT
SSCSILSDKFQFPSYLRVVPSDKIQSEAMVNLIKHFGWVWVGAVAADDDYGKYGVKTFKE
KMESANLCVAFSETIPKVYSNEKMQKAINAVKNSTAKVIVLYTSDIDLSPFVLELIHHNV
TDRTWIASEAWITSALIAKPEYFPYFGGSIGFALPRTTIPGLKEFLYDIHPSKDPNDVLT
IEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDQLCTGEEKLEDLKNTYLDMTQ
LRITNNVKQAVYAIAHALDLLSRCQEGYGPFGTNNACAYIPTFDFWQLMYYMKEIKFKSH
EEKWVVLDDNGDLKFGHYDILNWQLDDSGEISFVTVGRFNFKTDMFELIIPTNSTIFWNT
ESSRRPDSFCTQVCPPGTRKGIRQGQPICCFDCIPCADGYVSENPGQRECDPCGEDDWSN
AEKSKCVPKLVEFLAYEEALGLTLVILSIFGALVVLAVTVVYVIYRHTPLVKANDRELSF
LIQMSLVITVLSSMLFIGKSCNWTCMARQVTLALGFCLCLSSTLGKTISLFFAYRISKSK
TRLISMSPIYRKLIVLICVVGEIGVCTAYLVLEPPRMFKNIEPQNVKIIFECNEGSIEFL
CAIFGFDVFLALLCFLTTFVARKLPDNYYEGKCITFGMLVFFIVWISFVPAYLSTKGKFK
VAVEIFAILASSYGLLGCIFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSE
LNNTAVSTVLDE
Download sequence
Identical sequences G3V7C5
10116.ENSRNOP00000013778 ENSRNOP00000013778 XP_006232500.1.100692

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