SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > Genomes > Rattus norvegicus 69_3.4 > ENSRNOP00000015879

Domain assignment for ENSRNOP00000015879 from Rattus norvegicus 69_3.4

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:	ENSRNOP00000015879
Domain Number 1	Region: 821-899
Classification Level	Classification	E-value
Superfamily	DEATH domain	3.36e-19
Family	DEATH domain, DD	0.0000616
Further Details:

Domain Number 2	Region: 127-218
Classification Level	Classification	E-value
Superfamily	Immunoglobulin	5.93e-16
Family	I set domains	0.017
Further Details:

Domain Number 3	Region: 217-267
Classification Level	Classification	E-value
Superfamily	TSP-1 type 1 repeat	0.0000000000000353
Family	TSP-1 type 1 repeat	0.00054
Further Details:

Domain Number 4	Region: 273-320
Classification Level	Classification	E-value
Superfamily	TSP-1 type 1 repeat	0.00000000131
Family	TSP-1 type 1 repeat	0.0009
Further Details:

Domain Number 5	Region: 20-122
Classification Level	Classification	E-value
Superfamily	Immunoglobulin	0.00000143
Family	I set domains	0.036
Further Details:

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Molecular Function
Biological Process
Cellular Component

Cellular Component	IC (bits)	H-Score

Molecular Function	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

Protein sequence

External link(s)	Protein: ENSRNOP00000015879 Gene: ENSRNOG00000011858 Transcript: ENSRNOT00000015879
Sequence length	924
Comment	pep:known chromosome:RGSC3.4:16:67422994:67688547:1 gene:ENSRNOG00000011858 transcript:ENSRNOT00000015879 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	GADSGEVLPDSIPSAPGTLPHFIEEPEDAYIIKSNPIALRCKARPAMQIFFKCNGEWVHQ NEHVSEESLDESSGLKVREVFINVTRQQVEDFHGPEDYWCQCVAWSHLGTSKSRKASVRI AYLRKNFEQDPQGREVPIEGMIVLHCRPPEGVPAAEVEWLKNEEPIDSEQDENIDTRADH NLIIRQARLSDSGNYTCMAANIVAKRRSLSATVVVYVNGGWSSWTEWSACNVRCGRGWQK RSRTCTNPAPLNGGAFCEGMSVQKITCTALCPVDGSWEVWSEWSVCSPECEHLRIRECTA PPPRNGGKFCEGLSQESENCTDGLCILDKKPLHEIKPQRWSRRGIENASDIALYSGLGAA VVAVAVLVIGVTLYRRSHSDYGVDVIDSSALTGGFQTFNFKTVRQGNSLLLNPAMHPDLT VSRTYSGPICLQDPLDKELMTESSLFNPLSDIKVKVQSSFMVSLGVSERAEYHGKNHSGT FPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTELRTTGVFGHLGGRLVMPNTGVSLLIPHG AIPEENSWEIYMSINQGEPSLQSDGSEVLLSPEVTCGPPDMLVTTPFALTIPHCADVSSE HWNIHLKKRTQQGKWEEVMSVEDESTSCYCLLDPFACHVLLDSFGTYALTGEPITDCAVK QLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQEVVSDERHQGGQLLEEPKLLHFKGNTFS LQISVLDIPPFLWRIKPFTACQEVPFSRVWSSNRQPLHCAFSLERYTPTTTQLSCKICIR QLKGHEQILQVQTSILESERETITFFAQEDSTFPAQTGPKAFKIPYSIRQRICATFDTPN AKGKDWQMLAQKNSINRNLSYFATQSSPSAVILNLWEARHQQDGDLDSLACALEEIGRTH TKLSNITEPQLDDTDFNYSRQNGL
Download sequence
Identical sequences	NYSGRC-IgSF-ENSRNOP00000015879 ENSRNOP00000015879 10116.ENSRNOP00000015879

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]