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Domain assignment for ENSRNOP00000018267 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000018267
Domain Number 1 Region: 63-498
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 9.76e-99
Family L-arabinose binding protein-like 0.0018
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000018267
Domain Number - Region: 506-547
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00785
Family TNF receptor-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000018267   Gene: ENSRNOG00000028804   Transcript: ENSRNOT00000018267
Sequence length 847
Comment pep:known chromosome:RGSC3.4:1:141861806:141914331:-1 gene:ENSRNOG00000028804 transcript:ENSRNOT00000018267 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFSFLFAILVLKLSFPLCSPIDNRCFWRLKTKTFWEGDKEIDCFFFIYTRFGHVKNEQFS
GNLDKRLTSKTIHLILTLYFALEEINRNPHILPNISLLVKIECRLLDDWRINSLSSKREK
YLPNYYCINQRRYLIVLTGPMWLASVIVGPLLYITKRPELYYGPFHPLLSNQELYPYLYQ
MASKDLSLALAMVSLLVHFSWNWVGAVVSDDDPGYEFILELRREMQRNNFCLAFVSIIVS
DDNLFLKRYNIYYNQIKMSSAKVVIIYGDKDSPLQVNFRLWNLFDIQRIWVTTSQWDMII
NNGKFLLNSFYGTLSFSHHYSELSGFKTFIQTAYPSNYSDDFSLGILWWVYFNCSLSLSE
CKDLQNCPKENIFRWLFRHHFEMSLSDTTYDLYNSMYAVAYTLQQMLLKQADTWQIDDGK
EPEFDSWQMLSFLRNIQFINPVGDKVNLNHEEKLDTKYEIHQTLTFLPNPVFKLKIGTFS
QNLSHGRQLYMLKEMIEWNTGHQQSPTSVCSIPCSPGFRKSPQLGKPVCCFDCTPCPENE
ISNMTNMNQYIKCLDDQYANPGGTHCLKKVIVFLGYEDPLGMSLAILALCFSALTAFVLS
IFLKHQETPTVKANNRTLSYVLLISLISCFLCSLLFIGHPSFTTCIMQQTTFAVVFTVAA
STVLAKTIIVILAFKVTNTSRKMRWLLVSGAPKFIIPICTMIQLILCVIWLGTSPPFVDA
DGHVEKGHILIFCNKGSILAFYCVLGYLVSIAIASFTLAYFARNLPDTFNEAKFLTFSML
VFCSVWVTFLPVYHSTKGKSMVAVEVFCILASSAGLLFCIFAPKCFIILLRPEKKSFQKF
QNIHSKI
Download sequence
Identical sequences ENSRNOP00000018267 10116.ENSRNOP00000018267

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