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Domain assignment for ENSRNOP00000020321 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000020321
Domain Number 1 Region: 35-453
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 5e-82
Family L-arabinose binding protein-like 0.0086
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000020321
Domain Number - Region: 472-519
Classification Level Classification E-value
Superfamily TNF receptor-like 0.04
Family TNF receptor-like 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000020321   Gene: ENSRNOG00000015110   Transcript: ENSRNOT00000020321
Sequence length 565
Comment pep:known chromosome:RGSC3.4:1:64855429:64883885:1 gene:ENSRNOG00000015110 transcript:ENSRNOT00000020321 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MANFIDPKCFWRVNLNEVKDKDLSITCSFILEAVQMPTENDYFNQTLNILKTTKNHKYAL
ALAFSIDEINRNPDLLPNMSLIIKYPLGLCDGQTTLPTPYLFNEIYFRPIPNYFCNEETM
CTFLLTGPHWITSYSFWIHLNIFLSPSMNPKDTSLALAMVSFLLYFKWNWVGLVISDDDQ
GNQFLSELKKESKIKEICFAFVSMLAIDEISFYHKTEMYYNQIVMSSTNVIIIYGKTESI
IELSFRMWESPVIQRIWVTTKEMNFPTSKRDLTHDTFYGTLTFLHSHGEISGFKNFVQTW
YHLRITDLHLVMPEWKYFNYEASASNCKILKNYSSSASLEWLMEQTFDMVFSDGSRDIYN
AVNAMAHALHEMNLHLVDNQAIDNGKGASSHCFKINSFLRKTHFTNPLGDRVIMKEREIL
QEDYNIFHTWNFSQHIGFKVKIGKFSPYFPHGRHFHLYVDMIELATGSRKMPSSVCTEDC
SPGYRRFWKEGMAACCFVCSPCPENAISNETNMDQCVNCPEYQYANTKRDKCIQKNVMFL
SYKDPLGDDSCLHSLLFLCINSCCT
Download sequence
Identical sequences ENSRNOP00000020321 10116.ENSRNOP00000020321

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