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Domain assignment for ENSRNOP00000021129 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000021129
Domain Number 1 Region: 14-65
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000000000000437
Family TNF receptor-like 0.0037
Further Details:      
 
Domain Number 2 Region: 88-147
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000000145
Family TNF receptor-like 0.0019
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000021129
Domain Number - Region: 149-172
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000647
Family TNF receptor-like 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000021129   Gene: ENSRNOG00000015615   Transcript: ENSRNOT00000021129
Sequence length 604
Comment pep:known chromosome:RGSC3.4:13:11983096:12014371:1 gene:ENSRNOG00000015615 transcript:ENSRNOT00000021129 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PFQVTLQVTLPCTQERHYEHLGRCCSRCEPGKYLSSKCTPTSDSVCLPCGPDEYLDTWNE
EDKCLLHKVCDAGKALVAVDPGNHTAPRRCACTAGYHWNADCECCRRNTECAPGFGAQHP
LQLNVDTVCTPCLLGFFSDVFSSTDKCKPWTNCTVLGKMEAHQGTTESDVVCSSSLTLIK
PPKEAQVYLPSLIVLLLFISVVVVAAIVFSIYYRKGGKTLTANLWNWVNDACSSLSGNKE
SSGDHCVGSHSANSSQQEVCEGILLMTREEKMVPEDCAGVCGPVRAASGPWAEGRDARTF
TLVSEVETQGNLSRKIPTEDEYTDRPSQPPNGSLFLIQPGSRSTPPFQEPLEVGENDSLS
QCFTGTESMVDSEGCDFTEPPSRTDYMPASPEKLLTKEIEDDSCLPWVANSNSTDGYTGS
GNTPGEDHEPLPGSLKCGPLPQCAYSIGLPSEAAASLAEVGAQPQDRADERGASGSGSSP
SEQPPASGNVTGNSNSTFISSGQVMNFKGDIIVVYVSQTSQEGPGPAEPEPEPEPVGRPV
QEETLAHRDSFAGTAPRFPDACTTGAGLQEKGASRPKDWASRPVQEQGGAQASLNTQGSG
QCAE
Download sequence
Identical sequences ENSRNOP00000021129 10116.ENSRNOP00000021129 ENSRNOP00000021129

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