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Domain assignment for ENSRNOP00000022967 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000022967
Domain Number 1 Region: 78-129
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000235
Family TNF receptor-like 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000022967   Gene: ENSRNOG00000016782   Transcript: ENSRNOT00000022968
Sequence length 491
Comment pep:known chromosome:RGSC3.4:5:163716462:163762235:-1 gene:ENSRNOG00000016782 transcript:ENSRNOT00000022968 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSILLKAAGLLFLGMLQAFPKDRPLDTTCTGDLSYYPGEAARNCCYQCPSGLSPTQPCPQ
GPTARSSVILTTTNEDRKCTACVTCLPGLVEKAPCSGNSPRICECQPGMYCSTPAVNSCA
RCSEKTVVKFPDTAEKNTICDLPSPGSGPNGSNPDDCKTLTSHTTPQAIPTLESPANDSV
RSLLPKQVTDFVNEGATKLVKVPESSSSKASMPSPDPGNAEMNMTLKLPPPGTVPDISTS
ENSMEPASTASTLSLLVDARTSSRMQPTSPLSTGTPFLDPGSMLFWVAMVVLLVGSASFL
LCYWKACRRRFQRKFHLNYLQQTFQPKMEQVDSCPTEKLTQLQRSGSVTDSSAGHTLSPL
SPPAVETGASVGTACLETLPLLDDSITGNSFAPREPPEPRVSTEHTNNRIEKIYIMKADT
VIVGSVKTEVPEGRAPVGSTESELEAELEVDHTPHYPEQETEPPLGSCTEVMFSVEEGGK
EDHEPTTVSEK
Download sequence
Identical sequences ENSRNOP00000022967 ENSRNOP00000022967 10116.ENSRNOP00000022967

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