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Domain assignment for ENSRNOP00000025928 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000025928
Domain Number 1 Region: 206-322
Classification Level Classification E-value
Superfamily DEATH domain 6.77e-36
Family DEATH domain, DD 0.0001
Further Details:      
 
Domain Number 2 Region: 43-99
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0000000000212
Family TNF receptor-like 0.0031
Further Details:      
 
Domain Number 3 Region: 101-145
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000000141
Family TNF receptor-like 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000025928   Gene: ENSRNOG00000019142   Transcript: ENSRNOT00000025928
Sequence length 323
Comment pep:known chromosome:RGSC3.4:1:238259337:238274745:1 gene:ENSRNOG00000019142 transcript:ENSRNOT00000025928 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VWILLCPPLVLAGPELNVRMQGTDSISEGLELKRSVRETDNNCSEGLYQVGPFCCQPCQP
GERKVKDCTTSGGAPTCHPCTEGEEYTDRKHYSDKCRRCAFCDEGHGLEVETNCTRTQNT
KCRCKENFYCNASLCDHCYHCTSCGLEDILEPCTRTSNTKCKKQSSNYKLLWLLILPGLA
ILFVFIYKRYRKRQPGDPESGIPSPESVPMNVSDVNLNKYIWRTAEKMKICDAKKFARQH
KIPESKIDEIEHNSPQDAAEQKIQLLQCWYQSHGKTGACQALIQGLRKANRCDIAEEIQA
MVWEDHENSISNSRNENEGQSLE
Download sequence
Identical sequences 10116.ENSRNOP00000040348 ENSRNOP00000025928

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