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Domain assignment for ENSRNOP00000029064 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000029064
Domain Number 1 Region: 7-279
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.42e-79
Family L-arabinose binding protein-like 0.003
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000029064
Domain Number - Region: 434-641
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 0.000301
Family Calcium ATPase, transmembrane domain M 0.033
Further Details:      
 
Domain Number - Region: 339-386
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0306
Family TNF receptor-like 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000029064   Gene: ENSRNOG00000040218   Transcript: ENSRNOT00000033032
Sequence length 668
Comment pep:known chromosome:RGSC3.4:14:261363:268636:-1 gene:ENSRNOG00000040218 transcript:ENSRNOT00000033032 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFHPLFYTLQIFFGPFNPNLSDHDQFPYIYQIATKDTYLFRGMLSLMFHFGWTWIGLVIS
DDDQGIQFLSDLREEMQRHAICLAFVNMIPETMQTYKTRVKIYDQQIMTSSAKVVVIYGE
MNSTLELSFRRWAYLGAQRIWITTSQWDVITHKKDFSLDFFHGTVTFAHHHNDIPVFRNF
LQTINTSKYPIDISQSMLQWNHFNCSISKSNNKMDCFTFNNPLEWLAQHTFDMVLSEEGY
NLYNAVYAVAHTYHELILQQIESPKMEEPKGVFTDCQQISTVARIIVIHLKLPELLTSPY
FLRIWLQLLNIILSNMCTHTHTNHIIAKKMRLPMIQVPSSVCSVTCIAGFRKIHQKQTAN
CCFDCVQCQENEIANDTADMEQCVRCPDDSYANLEQTKCLQRAVTFLAYEDPLGMALGCM
ALSFSAITILVLVTFVKYRDTPIVKANNRILSYILLISLAFCFLCSLLFIGHPNQATCIL
QQTTFAIFFTVAISTVLAKTITVVTAFKLTTPGRRIRKMMIKGATNLLIPICTLIQLVLC
AIWLVTSPPFIDRDIQSEHGKVIIICNKGSVTAFHFVLGYLGSLALGSFTVAFLARNLPD
RFNEAKFLTFSMLVFYSVWITFLPVYHSTKGKVMVVVEVFSILASSAGLLGCIFVQKCYV
LLVRPDLN
Download sequence
Identical sequences 10116.ENSRNOP00000029064 ENSRNOP00000029064

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