SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSRNOP00000029762 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSRNOP00000029762
Domain Number 1 Region: 214-314
Classification Level Classification E-value
Superfamily HIN-2000 domain-like 3.14e-40
Family HIN-200/IF120x domain 0.0000804
Further Details:      
 
Domain Number 2 Region: 316-402
Classification Level Classification E-value
Superfamily HIN-2000 domain-like 8.63e-32
Family HIN-200/IF120x domain 0.00016
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000029762
Domain Number - Region: 6-60
Classification Level Classification E-value
Superfamily DEATH domain 0.0318
Family Pyrin domain, PYD 0.055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000029762   Gene: ENSRNOG00000003486   Transcript: ENSRNOT00000036040
Sequence length 438
Comment pep:known chromosome:RGSC3.4:13:89753001:89768812:-1 gene:ENSRNOG00000003486 transcript:ENSRNOT00000036040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSNEYKRIVLLKGLEPLSSHHFSLFKSLLASDLKLERHMQEQYTKVQIADMMEDEFPDDA
GLGKFIKFCEDLPALRKRAEILKRERIQVRGETPREINRREPGPSRPSSTASHMIVSEGW
ETSTAQAETSTAQGEPSTAQKRKSMSEGKTEVKKTKASERPDQPPCPEEATAKCLSPIPQ
TSSLAPCNSPLAKCSMENQNIQTQNQNIPRGAVLQTEPLTVMVLKATDPFEYESAEHGVK
NMFLATVVTVDRYFHVKVFNSNLKEKFKKNNFIIISNYFKRTDILEINEASLVSEAAPDK
KIAVPNKRIKEAKKSPKIRDIKEGTSRDLFYGVFTLIKKKVCPKNTIYELKDDTGNIEVV
GSGKWYNINCNEGDNFQLFCFHLKTIDRQQKLVCGKHSFIKVTRAREKKEAATAHPSTKK
EEGTHYPKDKFNAFKEEK
Download sequence
Identical sequences Q5U2R8
NP_001012029.1.100692 NP_001012029.1.4139 10116.ENSRNOP00000029762 ENSRNOP00000029762 ENSRNOP00000029762

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]