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Domain assignment for ENSRNOP00000032760 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000032760
Domain Number 1 Region: 3-316
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 9.42e-71
Family L-arabinose binding protein-like 0.0074
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000032760
Domain Number - Region: 327-372
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0212
Family TNF receptor-like 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000032760   Gene: ENSRNOG00000021583   Transcript: ENSRNOT00000037646
Sequence length 665
Comment pep:known chromosome:RGSC3.4:12:18854057:18863645:1 gene:ENSRNOG00000021583 transcript:ENSRNOT00000037646 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNNSEKFPFLYQMAAKESSLALGMVSLFVHFKWNWVGLVISQDENGVNFVTDLIPQMERN
TVCVAFMEFIPVTHIMDLDNAYEYPIRIVRYPAKVVIVYPNTDSSLGVLFRRWEYILPWR
IWVTTSQWETFNGTLIFSQRQGDISTFKEFVKTVRPSKYPDDIFLARLWEIYFDCAISNA
ICSSRGNLGLLPWYHFDIAVSTGSYHVYNAVYAVAHTMHKMLTQKVDLQGMKNGGSMDFP
PLKVLKIVQYQQNIKFMNPGGDPISLNPSESLHIDYDILNFWDFPQGLTYKVKVGTFSPY
FPPGQQLSISEDKIEWSIGVEQQIPVSVCSESCGPGFRKSLQEGKAACCFDCVPCPENEI
SNGTDIDQCVKCTEDQYANTDRTVCIQKPVTFLALENPLGMTLASMALCFPILTSFVLGI
FVKHQNTPVVKANNSTLSYILLFSFTFCFLCSFIFIGQPNTSTCILQQTTFGVVFTVAVS
TVLAKTITVILAFKSTAPGRRLRWLLISGAPKFIIPICTLIQTVLCGFWLGISPPFVDTD
AHSEHGHIIIMCNKGSVTAFYCVLGYLGALSLVSFTVAFMARNLPDTFNEAKFLTFSMLV
FLSVWITFLPVYHSTKGKIMVAVQVFSILASSTGLLGCIFIPKCYIILARPDMNSSKSRR
NRVQW
Download sequence
Identical sequences 10116.ENSRNOP00000041617 ENSRNOP00000032760

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