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Domain assignment for ENSRNOP00000035757 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000035757
Domain Number 1 Region: 31-513
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 5.89e-95
Family L-arabinose binding protein-like 0.0005
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000035757
Domain Number - Region: 522-567
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0221
Family TNF receptor-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000035757   Gene: ENSRNOG00000028538   Transcript: ENSRNOT00000039463
Sequence length 856
Comment pep:known chromosome:RGSC3.4:4:159958712:159999747:1 gene:ENSRNOG00000028538 transcript:ENSRNOT00000039463 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKLLIVFSLLIVLIVFQVQISYVSLNNPASPGYYQDGDFVIGGLFSLRMTTGDTRSKLFD
FKDAIYLPEYVYGYLTKHYQHMLAMIFAIEKINKDPNILFNMSLGFYLFNVDFIEKKAIE
SSMALLSGESPPVPNYSCRPEKTDKLVAVIGGISTGISTQISRVLSLYNIPQISYAPFDH
SLGTRVQLQSPYQFPMHTTALYHGIIQLLLYFTWVWVGMVVTDDMRGELFLRDITEEMNN
HGLCVAFVEKIPEFSAQDRVTKKAFMERYTSTRVIVGFGDTYSLLRFVSSIIFHTNFGNV
WITTSYWDFTILPFYQFISRALFSVGRLSFSVRMDQILGFKDFLRSVQPRKYPHDIFLQD
VWSILFKCPYSYQHGVRILTQCEQNGTLSTRPLHVWDMNTLPPSYKVHAAVYAIAQALHE
ELSLGMEGDSFTKCVPQTHLPWKLHPFLQKGKLWRRTNQENIINKEVLATVFDIFNSQSL
QKGNEVQVQVGEFVFESHSVQHFSLNEKLITWPRNQKEIPLSLCSQSCPLGFRKTPVEGK
PSCCFDCLPCPDGEIANETDMDQCIKCPEDQYPNKQRNQCLPKITAFLSCEDPLGAVLVS
VAISLSAFSAMILGLFIHYRDTPIVRANNRNLSYLLLVSLMLCFFCSLIFICQPTTVTCI
LRQMIFGVVFSITISAILAKTFIVVVAFKVIKPGSTLQTWMVTRVSNAIVCCGSSIQVCI
CAVWLGTYPPFPDVDMQSEFGQIILWCNEGSTLAFYCVLGYLGFLASLSLLIAFLARRLP
DTFNEAKTITFSMLVFCSVWISFVPTYLSSKGKTMVAVEILSILASSSTLLGCIFLPKCY
VILMRSGGHSRKKIFK
Download sequence
Identical sequences D3ZSU0
10116.ENSRNOP00000035757 ENSRNOP00000035757 ENSRNOP00000035757 NP_001092984.1.100692 NP_001092984.1.4139

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