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Domain assignment for ENSRNOP00000038919 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000038919
Domain Number 1 Region: 298-355
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.92e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 2 Region: 411-467
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.72e-24
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 3 Region: 466-523
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.94e-24
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 4 Region: 578-635
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.1e-23
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 5 Region: 6-63
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.22e-22
Family KRAB domain (Kruppel-associated box) 0.0011
Further Details:      
 
Domain Number 6 Region: 522-579
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.61e-22
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 7 Region: 354-411
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3e-22
Family Classic zinc finger, C2H2 0.0072
Further Details:      
 
Domain Number 8 Region: 242-299
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.69e-19
Family Classic zinc finger, C2H2 0.0061
Further Details:      
 
Domain Number 9 Region: 620-672
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.1e-19
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000038919   Gene: ENSRNOG00000006958   Transcript: ENSRNOT00000038584
Sequence length 685
Comment pep:known chromosome:RGSC3.4:12:11679515:11691001:-1 gene:ENSRNOG00000006958 transcript:ENSRNOT00000038584 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNTSLAPLSFKDVAVAFSQEEWQQLDSEERTTYRDVMLETYSNLVSVGYHIIKPDVIIKL
ERGDEPWIVEGALSPRSYPDEIWHASSPMEEVQEDEEDQSRSAVFSYGSLLDASRMAAEV
AKKLAPSGKVLPKCSSCEESLMCVSAFIRSDGSYAKLRPNVCAGCGKPLLHGKLEKTHPG
DDELSGDGEEDCSLREESVYQNVRFVEKPLDYVEWQKPFPKSAVFLNHLEEEPCDWNDSE
EAFLQTSDLSTHQESLMEMKPYDCQQCGKSFCKRSKFIIHQRTHTGEKPFKCNQCGKSFC
QKGTLTVHQRTHTGEKPYECTECGKTFYQKLHLIQHQRTHSGEKPYKCSYCGKSFCQKTH
LTQHQRTHSGERPYVCHDCGKTFSQKSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTH
MRTHTGEKPYECNECGKFFSRLSYLTVHYRTHSGEKPYECTECGKTFYLNSALMRHQRVH
TGEKPYECTECGKLFSQLSYLTVHHRTHSGVKPYECSECGKTFYQNSALCRHRRIHRGEK
PYECYICGKFFSQMSYLTIHHRIHSGEKPYECSECGKTFCQNSALNRHQRTHTGEKAYEC
YECGKCFSQMSYLTIHHRIHSGEKPFECNECGKAFSRMSYLTVHCRTHSGEKPYECTECG
KKFYHKSAFNSHQRTHRRGNGSGVD
Download sequence
Identical sequences ENSRNOP00000038919 ENSRNOP00000038919 10116.ENSRNOP00000038919

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