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Domain assignment for ENSRNOP00000039201 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000039201
Domain Number 1 Region: 31-510
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.65e-92
Family L-arabinose binding protein-like 0.00069
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000039201
Domain Number - Region: 520-565
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0226
Family TNF receptor-like 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000039201   Gene: ENSRNOG00000037155   Transcript: ENSRNOT00000045305
Sequence length 854
Comment pep:known chromosome:RGSC3.4:4:160131202:160182607:-1 gene:ENSRNOG00000037155 transcript:ENSRNOT00000045305 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKLLIAFSLLIVLIVFQEQISWFSLSIPASPGYYQDGDFVIGGLFSLRVTAGDTKSKFGF
KDTISMPDIVYADFTKHYQHMLAMVFAIENINKDPNILFNMSLGFYLFNVDFIEMKAVES
SMALLSGETPPVPNYSCRPEKTDKLVAVIGGISTGISTQISRVLSLYNVPQISYAPFDQS
LGTEVQLQSPYQFPVHTTALYQGIIQLLLYFTWIWVGLVVPDDVRGELFLRDITEEMNNH
GLCVAFAEKVPEFPARDTINRKLFMERFILTRVIVAFGDTYSLLRFVYNIYCNTPFGNIW
ITTSDWDITTLPFQQNLGYTYFGGGLSFSVHTDEILEFKDFLRSVQPRKYPQDIFIQDVW
SNLFECPYLDKDWIRELSQCEQNGNLSTRPLYLWDMNTSPSSYKVHFAVYAIAEALHEEL
SLTVEGDSLRKGGPRALLPWKLHPFLQKCQLGRSSNEQNVMNNEVSATKLDIFNYQSLQS
GTKAQVKVGKFVYESHSVQHFSLNDKIIMWGEHHNHTPFSVCSQSCPLGFRKSPIEGKPF
CCFDCLPCPDGEIANETDMDQCIKCPEDQYPNKQRNWCHPKITAFLSHEDTLGAVLVSVA
ISLSVFSAMILGLFICYRDTPIVRANNRNLSYLLLVSLMLCFFCSLIFIGQPRTVTCVLR
QTIFGVVFSIAISAILAKTFIVVVAFKAIKPGSTLQTWMVTRVSNAIVCCGSIIQVCICA
VWLGTYPPFPDVDMHSEFGQIILWCNEGSTLAFYCVLGYLGFLASLSLLIAFLARRLPDT
FNEAKTITFSMLVFCSVWISFVPAYLSSKGKTMVAVEILTILASSAGLLGCIFLPKCFVI
LLKSGGLPRKKFSI
Download sequence
Identical sequences D3ZHA4
ENSRNOP00000039201 10116.ENSRNOP00000039201 NP_001092980.1.100692 NP_001092980.1.4139 ENSRNOP00000039201

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