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Domain assignment for ENSRNOP00000040457 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000040457
Domain Number 1 Region: 2-413
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 9.76e-96
Family L-arabinose binding protein-like 0.0000196
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000040457
Domain Number - Region: 437-483
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0942
Family TNF receptor-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000040457   Gene: ENSRNOG00000030940   Transcript: ENSRNOT00000047405
Sequence length 788
Comment pep:known chromosome:RGSC3.4:1:73171753:73187418:-1 gene:ENSRNOG00000030940 transcript:ENSRNOT00000047405 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQSFVFAIEEINKSAELLSNLTLGFSIRNSGDSVHGALYEMMGFLTGQDEPIPNYTCQYG
SAQAALVGDTRSSLSVSMARLLGLYKFPQISYSSSLPSLSDKIQFPSFLRTLPSDLTSCH
AVTQLIIHFQWSWVIILSQDDDFGEQASSLATQQLSAAGVCIEFHLHVPSQESLGKIEET
VQKMQKCTARVVLVFLNNSNFQLILSGLLAASVSGQVWVSNGILHIAMALSIPGISQVLQ
GTLGLLYDCSRAIGFPDFLAHLRPSQTPEDMFIKKFWESTFDCTWPYQNSTVTEGVQVCS
GNESLKNKPHSFPEVSKIDDAYTAVYSIAHALHDMIASAHQDGIDTNPQDFHHWQLLHAL
KKVHFKTLDGTKIMFDVNGDLVTKFDILQGQKTPTGVFHWVHVGMIDPQVSSGNKMMVQL
KEDLQVGALNAEITVPTSICSESCLPGFSQVPRLGAPHCCFDCSPCPEGQFADQRDMKRC
LLCPKEQYSSHTRDHCLPRTEIFLAFEEPLGFILTLMAILLAGLALLVLGVFLKHRDIPV
VRANNRTLSYFLLISLSLCSLCSLLFLGRPTVTTCLLRQTTFAVVFTVAVSSVLAKTLTV
VLAFRVTKPGSRIQVCLSPGASTSVILIASLIQAVLCGVWLATSPPFPERDMISEPRHIV
IQCQEGSGATFFCVLGFLGFLAGGTFSVAFLARALPDVFNETKFLTFSMLLFCSVWTAFL
PLYHSARGKSTVAVEIFSILASTAGLLGGIFIPKCYIILLKPEKNTPAWLRQGHCAHQDR
QFSMLHRR
Download sequence
Identical sequences F1M1S0
ENSRNOP00000040457 10116.ENSRNOP00000040457 NP_001092953.1.100692 NP_001092953.1.4139

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