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Domain assignment for ENSRNOP00000042008 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000042008
Domain Number 1 Region: 546-927
Classification Level Classification E-value
Superfamily RNI-like 1.23e-58
Family 28-residue LRR 0.00018
Further Details:      
 
Domain Number 2 Region: 4-92
Classification Level Classification E-value
Superfamily DEATH domain 2.35e-27
Family Pyrin domain, PYD 0.031
Further Details:      
 
Domain Number 3 Region: 128-235
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000238
Family YjeE-like 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000042008   Gene: ENSRNOG00000015527   Transcript: ENSRNOT00000050492
Sequence length 953
Comment pep:known chromosome:RGSC3.4:1:64658177:64674842:-1 gene:ENSRNOG00000015527 transcript:ENSRNOT00000050492 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASFSSDFSLVWYLKELNQKEFMKFKDFLIQEILELKLKQISWTEVKKASREGLSNLLLK
CYGENQALDMTFKILQKINRKDLTKKATREIAENSKLYREHLKKKLSHNCSKMFNINIQD
FILETVIQDDYDTFENLLVSKGDEKKPHMVFLKGMAGIGKTLMLKNVMLAWAKGLVFQNK
FSYTFYFCCQDVKQLKTASLAELISREWPISSAPIEEILSQPEKLLFIIDSLEGMEWDLT
KQESELCGNCTEKQPVSLLLSSLLRRKMLPESSFLISATPETFEKMEDRIRCTDVKTATA
FNERSIEICFHRLFQDRNTAQKAFSLVRENEQLFTLCQAPLLCWMVATCLKKEIEKGKDP
VSICRHITSLYTTYIFNSFIPQSAKYPSKKSQDQLQGLCSLAAEGMWTDTFVFSEEALRR
NGIMDSDIPTLLDIGMLGKIREFENSYLFLHPSVQEICAAIFYLLKSHGVHPSQDVKSVE
TVLFMFLKKVKTQWILWGSFIFGLLHKSEQEKLAVFFGYQLSQKIRHKLYQCLETINGNV
ELQEQIDGMKLFYCLFEMEDDAFLVKAVNCMQQINFVANYYSDFFVAAYCLKRCSTLKKL
SFSTQNALNEELEQQYRERLLICWNDICSVFVRSKNIQTLQIKDTNFSEPTFRVLYESLK
YPSFPLSKLVANNVHFFGDNHMFFELIQNHNLQYLDLSCSSLSPNGVKLLFDVLNQAECN
IEKLMVAHCKLSPDDCKIFGSILMSSKTLKILNLASNNLNQGISSLCEGLCHPNCVLEYL
VSGSNQSIVIFLLKFECQITTRGCQDLAEVLRNNQNLKHLHVSNNKLKDAGVKLLCDAIK
HPNCHLVDLGLEACEITGASSENLSFAFIQCKTLKRLTLKGNAFEISGMVFPPKKSELIL
FIFFTSFKTITDFDNEFQAFLLSEEKKNYFLTIRSSVEAEEENKGENSDARAM
Download sequence
Identical sequences 10116.ENSRNOP00000043973 ENSRNOP00000042008

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