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Domain assignment for ENSRNOP00000042077 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000042077
Domain Number 1 Region: 49-485
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.81e-103
Family L-arabinose binding protein-like 0.0039
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000042077
Domain Number - Region: 567-684
Classification Level Classification E-value
Superfamily Clc chloride channel 0.00471
Family Clc chloride channel 0.021
Further Details:      
 
Domain Number - Region: 508-557
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00918
Family TNF receptor-like 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000042077   Gene: ENSRNOG00000033073   Transcript: ENSRNOT00000044004
Sequence length 850
Comment pep:known chromosome:RGSC3.4:14:628951:635811:-1 gene:ENSRNOG00000033073 transcript:ENSRNOT00000044004 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKELCTFTISFLLLKFSFIMWGLTEPSCFWRIKNNGDNDGDLRTDCGFVLFTRQEPIEEN
FYNEIVYFRIPARSYEFFLVMFFATDEINKNPYLLPNMSLIFSLIVGMCEDTLEYVDTNY
SFKRNTLNIVNYNCYLRARCYIQLTGPSWKTSLKLTINSRKPKVFFGPFNPNLSDRDQFP
YVNQIARKDTFLSHAMISLMLFFEWTWIGLAISDDDQGIQFLSVTREVMQKHSICSAFVN
VIPENMQIYMARANIYDKQIMTSSAKVVIIYGERNSTLEVSFRRWEYLGAQKIWITTSQW
DVITNKRVFSLDFFHGTVTFAYHNGRIPKFRNFMQTMNTSKYPVDISQTILEWNYFNCSI
FKNSDSEMNHFTSKNTEEWLAQHKFDMVLSEEGYNLYNAVYAVAHTYHELILQEVESQKI
LRHKGRFINCQQVASLLKTRIFMNPVGELVNMNQRENQCAEYDIFNIWNFPQGLGLKVKI
GSYFSCFPQSQQLQISEDLKWATGGTSVPTSMCSVTCTAGFRKIHQNEAAHCCFDCALCP
ENEVSNDTADMEQCVRCPDDKYANLEQTYCIQRHVSFLAYEEPLGLTLGCMALCFSALTI
LVLVTFVKHKNIPVVKANNCILSYILLISLIFCFLCSLLFIGHPKKTTCILQQITFGIFF
TMAISTVLAKTITVVMAFKLTTPGRRMRRILASGAPNLIIPICTLIQLVICGTWLATSPP
FIDRDIQSEHGKVIIICNKGSVTAFHFVLGYLRSLALGSFAVAFLARNLPDRFNETKFLT
FSMLVFCSVWITFLPVYHSTRGKVMVVVEVFSILASSAGLLGCVFIPKCYVILVRPNSNF
LQKYKNKLLY
Download sequence
Identical sequences D4A754
ENSRNOP00000042077 10116.ENSRNOP00000042077 NP_001092951.1.100692 NP_001092951.1.4139 ENSRNOP00000042077

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