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Domain assignment for ENSRNOP00000043176 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000043176
Domain Number 1 Region: 560-880
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 7.76e-104
Family PDEase 0.000000594
Further Details:      
 
Domain Number 2 Region: 346-537
Classification Level Classification E-value
Superfamily GAF domain-like 8.07e-48
Family GAF domain 0.000029
Further Details:      
 
Domain Number 3 Region: 187-338
Classification Level Classification E-value
Superfamily GAF domain-like 1.42e-20
Family GAF domain 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000043176   Gene: ENSRNOG00000011310   Transcript: ENSRNOT00000045843
Sequence length 883
Comment pep:known chromosome:RGSC3.4:1:46392900:46495004:-1 gene:ENSRNOG00000011310 transcript:ENSRNOT00000045843 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSKKRKALEGGGGGGEPQLPEEEPTAWFGGSSEEPAGCLPITFKGGSKGPALLALRNRTD
SRGQMSNDSPEGAVGSCNATGSTGSTGELGKEFHTPPRRKSASDSRLALCMGLTDEKVKA
YLSLHPQVLDEFVSESVSAETVEKWLKRKNNKAEDEPSPKEVSRYQDTNMQGVVYELNSY
IEQRLDTGGDNHLLLYELSSIIRIATKADGFALYFLGECNNSLCVFTPPGMKEGQPRLIP
AGPITQGTTISAYVAKSRKTLLVEDILGDERFPRGTGLESGTRIQSVLCLPIVTAIGDLI
GILELYRHWGKEAFCLSHQEVATANLAWASVAIHQVQVCRGLAKQTELNDFLLDVSKTYF
DNIVAIDSLLEHIMIYAKNLVNADRCALFQVDHKNKELYSDLFDIGEEKEGKPVFKKTKE
IRFSIEKGIAGQVARTGEVLNIPDAYADPRFNREVDLYTGYTTRNILCMPIVSRGSVIGV
VQMVNKISGSAFSKTDENNFKMFAVFCALALHCANMYHRIRHSECIYRVTMEKLSYHSIC
TSEEWQGLMHFNLPARICRDIELFHFDIGPFENMWPGIFVYMIHRSCGTSCFELEKLCRF
IMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHRGFS
NSYLQKFDHPLAALYSTSTMEQHHFSQTVSILQLEGHNIFSTLSSSEYEQVLEIIRKAII
ATDLALYFGNRKQLEEMYQTGSLNLHNQSHRDRVIGLMMTACDLCSVTKLWPVTKLTAND
IYAEFWAEGDEMKKLGIQPIPMMDRDKRDEVPQGQLGFYNAVAIPCYTTLTQILPPTEPL
LKACRDNLNQWEKVIRGEETAMWISGPATSKSTSEKPTRKVDD
Download sequence
Identical sequences ENSRNOP00000043176 10116.ENSRNOP00000049588

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